PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00097.1.g01530.1.sm.mkhc

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 434aa MW: 47709.7 Da PI: 6.7252

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00097.1.g01530.1.sm.mkhc	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	36.8	8.4e-12	154	184	3	33
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLee 33 +lk rr+++NReAAr+sR+RKka+i++Le Zjn_sc00097.1.g01530.1.sm.mkhc 154 QLKTIRRLAQNREAARKSRLRKKAYIQQLES 184 6899*************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF00170	6.7E-9	154	185	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	8.646	154	198	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.13E-6	156	189	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.7E-7	157	184	No hit	No description
PROSITE pattern	PS00036	0	159	174	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	7.4E-30	236	309	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence Send to blast
MPQDAVVWRP GGFEDRRVQT VGATSTAAKN EVASDQAGST YFGELEEALM HEVATLRTQK 60 AAATSMAHDG DTTSFPIAAA TATATAGPLP PTLDIFPSWP LRSFVHAHKE YSNVTGGSTD 120 SESSSKNSSE HSSDQQGAAA TSMASQLDQV PQLQLKTIRR LAQNREAARK SRLRKKAYIQ 180 QLESSKLKLA QMEQDVQRAR ARGLLLGGAP GANTSSGAAL FDMEHARWLE DHARRMAELH 240 RALHAHLQDG ELRALVDDTL THHNELFRLK AVATKADVFH LITGVWTSPA ERCFLWMGGF 300 RPSDLLRTLL PQLDPLTEQQ VIDICNLQQS SQQAEEALSQ GLEQLHQSLA DTMAGGSLIE 360 DANMSFMGQM ALALGKLSNL EGFVIQADNL RQQTLHQIYW ILTVRQAARC FLAIGEYHNR 420 LRALSSLWAS RPQE

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence Send to blast

MPQDAVVWRP GGFEDRRVQT VGATSTAAKN EVASDQAGST YFGELEEALM HEVATLRTQK  60
AAATSMAHDG DTTSFPIAAA TATATAGPLP PTLDIFPSWP LRSFVHAHKE YSNVTGGSTD  120
SESSSKNSSE HSSDQQGAAA TSMASQLDQV PQLQLKTIRR LAQNREAARK SRLRKKAYIQ  180
QLESSKLKLA QMEQDVQRAR ARGLLLGGAP GANTSSGAAL FDMEHARWLE DHARRMAELH  240
RALHAHLQDG ELRALVDDTL THHNELFRLK AVATKADVFH LITGVWTSPA ERCFLWMGGF  300
RPSDLLRTLL PQLDPLTEQQ VIDICNLQQS SQQAEEALSQ GLEQLHQSLA DTMAGGSLIE  360
DANMSFMGQM ALALGKLSNL EGFVIQADNL RQQTLHQIYW ILTVRQAARC FLAIGEYHNR  420
LRALSSLWAS RPQE

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in defense response. {ECO:0000250\|UniProtKB:Q7X993}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025809311.1	0.0	transcription factor TGAL4-like isoform X2
Swissprot	Q53Q70	0.0	TGAL4_ORYSJ; Transcription factor TGAL4
TrEMBL	A0A2T7E565	0.0	A0A2T7E565_9POAL; Uncharacterized protein
STRING	Si014861m	0.0	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4444	36	70

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08320.2	1e-112	bZIP family protein

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Chern M, et al. Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins. BMC Genomics, 2014. 15: p. 461 [PMID:24919709] Miyamoto K, et al. Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells. J. Plant Physiol., 2015. 173: p. 19-27 [PMID:25462074]