PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00092.1.g00390.1.am.mk

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Nin-like

Protein Properties

Length: 787aa MW: 85847.2 Da PI: 4.7368

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00092.1.g00390.1.am.mk	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	37.4	5.1e-12	675	723	3	50
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGI.kRWPhRkik 50 +++++ d F+l+ k+AAk+L+++++ LKr C ++G +RWP R+i+ Zjn_sc00092.1.g00390.1.am.mk 675 ANMTMADATCLFHLSRKEAAKHLKISPSSLKRLCNRNGAgHRWPARRIN 723 68899999999*********************9999868****97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	13.401	659	745	IPR003035	RWP-RK domain
Pfam	PF02042	1.3E-12	676	723	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 787 aa Download sequence Send to blast
MARSDSSYIP PRVPESIRFR AETLASAPRP AGTRKLPHPE QAPLRAVLTR PLAAAVSNPF 60 HTPAARRLAI PVAALRFSPC PNIPVPAPLA VATMSDEVYE AEYDVRRYQC QHIPLPDPPH 120 QVLAGSDEAP VGEPQHMPPV DHALQAPPTL NPGPAPVPAT TGFEAPAVDV IERSQTPAIN 180 AEYCQAPPVD AGHYQAPPTD DFEHYLHTLP AMDIEHHHHA PPTIDSEHCH YQQAPAMDIE 240 QPQMLAPEQA FGFPEPPLQV AAGVDFDALP SENYQAPLTA DVEHYQEPPT IGFEHHQRGP 300 ARDIEPPQML APEQVFGFPE SPLMEPAGVD FDDLPSGNYQ APPTADVEHY RAPPTIDVEH 360 YQQAPAMDIE PLQMVPPEQS FVFPESPLLA ADEFDFDTLP SFDEGMLHEA PAGTGSPLLY 420 DQSLVNDEQD EVATFTEGIE ASNDTGGAAV AEVEPDVGPP IDEDNLIFVP FVPGQLDCTD 480 CCTVRELLHE SANHKLFLIV HGADHGPVFH HAIIDRTYIG ADGETKTNEL TYLDLRQRTH 540 HWVQCFIASW LQVLRDDTSG QLKDSWSAFS AAAAGTNNIG TTFPVNNAAH MELEIDMLKK 600 ILSEPSANDK EAAAPLAPEA SHQAITPQGV EISQNNQNDW HGLDVPILDS SNLDAEDGSP 660 GEHASLLAVQ RKRIANMTMA DATCLFHLSR KEAAKHLKIS PSSLKRLCNR NGAGHRWPAR 720 RINGINTKIK KLEEAAARNG GRIGMMAIRE KLGKLKLERA QLYASTMKSI RENEMNKGAG 780 SSGSKKL

Sequence ? help Back to Top

Protein Sequence Length: 787 aa Download sequence Send to blast

MARSDSSYIP PRVPESIRFR AETLASAPRP AGTRKLPHPE QAPLRAVLTR PLAAAVSNPF  60
HTPAARRLAI PVAALRFSPC PNIPVPAPLA VATMSDEVYE AEYDVRRYQC QHIPLPDPPH  120
QVLAGSDEAP VGEPQHMPPV DHALQAPPTL NPGPAPVPAT TGFEAPAVDV IERSQTPAIN  180
AEYCQAPPVD AGHYQAPPTD DFEHYLHTLP AMDIEHHHHA PPTIDSEHCH YQQAPAMDIE  240
QPQMLAPEQA FGFPEPPLQV AAGVDFDALP SENYQAPLTA DVEHYQEPPT IGFEHHQRGP  300
ARDIEPPQML APEQVFGFPE SPLMEPAGVD FDDLPSGNYQ APPTADVEHY RAPPTIDVEH  360
YQQAPAMDIE PLQMVPPEQS FVFPESPLLA ADEFDFDTLP SFDEGMLHEA PAGTGSPLLY  420
DQSLVNDEQD EVATFTEGIE ASNDTGGAAV AEVEPDVGPP IDEDNLIFVP FVPGQLDCTD  480
CCTVRELLHE SANHKLFLIV HGADHGPVFH HAIIDRTYIG ADGETKTNEL TYLDLRQRTH  540
HWVQCFIASW LQVLRDDTSG QLKDSWSAFS AAAAGTNNIG TTFPVNNAAH MELEIDMLKK  600
ILSEPSANDK EAAAPLAPEA SHQAITPQGV EISQNNQNDW HGLDVPILDS SNLDAEDGSP  660
GEHASLLAVQ RKRIANMTMA DATCLFHLSR KEAAKHLKIS PSSLKRLCNR NGAGHRWPAR  720
RINGINTKIK KLEEAAARNG GRIGMMAIRE KLGKLKLERA QLYASTMKSI RENEMNKGAG  780
SSGSKKL

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP14429	10	12

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.2	2e-08	Nin-like family protein