PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zjn_sc00091.1.g01600.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 416aa MW: 46395.1 Da PI: 8.5694 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 168.2 | 2.8e-52 | 123 | 249 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgy 82 +pGfrFhPtdeelv++yLk+k+++k++++ e i+++diyk++PwdLpk ++++ekewyf+++rd+ky+++ r+nr+t++g+ Zjn_sc00091.1.g01600.1.am.mk 123 MPGFRFHPTDEELVSFYLKRKIQQKPISI-ELIRQLDIYKYDPWDLPKLASTGEKEWYFYCPRDRKYRNSLRPNRVTAAGF 202 69***************************.89***************9888999*************************** PP NAM 83 Wkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 Wkatg+d++++s+ +++ +glkk+Lvfy+gra +g ktdW+mhe+rl Zjn_sc00091.1.g01600.1.am.mk 203 WKATGTDRPIYSSeGTKCIGLKKSLVFYQGRAARGMKTDWMMHEFRL 249 ************956667***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 52.311 | 122 | 274 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 2.09E-54 | 122 | 255 | IPR003441 | NAC domain |
Pfam | PF02365 | 8.8E-26 | 124 | 249 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 416 aa Download sequence Send to blast |
MRSQATESRG RLQPQSKGVN GVAGNWGDKR MEQSFQGVSD PLHGPNLCPP AIGGGKGSHL 60 GQNFRNDQTS QKQHAIIRSI KQAADCWSRL DQHRSGVKLF FTPLEDMEVK NDANMDKADE 120 IIMPGFRFHP TDEELVSFYL KRKIQQKPIS IELIRQLDIY KYDPWDLPKL ASTGEKEWYF 180 YCPRDRKYRN SLRPNRVTAA GFWKATGTDR PIYSSEGTKC IGLKKSLVFY QGRAARGMKT 240 DWMMHEFRLP SPTDPSLPKR PIDKNIPLNR GLSHSWGPPF PGATEAEFFS AFQTVQASEL 300 ALESSSCSLQ AAPPAGSSQF TSRHGLLVFG AQHDHQLNGF VVDSSAEVNG GTSSRSQDSS 360 AKKSSIGFSM SNSDWEAVGR INFPFDLGAD ASEEWRCNIP WESVLSPPAV QTELPH |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 5e-48 | 124 | 253 | 19 | 146 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 5e-48 | 124 | 253 | 19 | 146 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 5e-48 | 124 | 253 | 19 | 146 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 5e-48 | 124 | 253 | 19 | 146 | NO APICAL MERISTEM PROTEIN |
3swm_A | 7e-48 | 124 | 253 | 22 | 149 | NAC domain-containing protein 19 |
3swm_B | 7e-48 | 124 | 253 | 22 | 149 | NAC domain-containing protein 19 |
3swm_C | 7e-48 | 124 | 253 | 22 | 149 | NAC domain-containing protein 19 |
3swm_D | 7e-48 | 124 | 253 | 22 | 149 | NAC domain-containing protein 19 |
3swp_A | 7e-48 | 124 | 253 | 22 | 149 | NAC domain-containing protein 19 |
3swp_B | 7e-48 | 124 | 253 | 22 | 149 | NAC domain-containing protein 19 |
3swp_C | 7e-48 | 124 | 253 | 22 | 149 | NAC domain-containing protein 19 |
3swp_D | 7e-48 | 124 | 253 | 22 | 149 | NAC domain-containing protein 19 |
4dul_A | 5e-48 | 124 | 253 | 19 | 146 | NAC domain-containing protein 19 |
4dul_B | 5e-48 | 124 | 253 | 19 | 146 | NAC domain-containing protein 19 |
Search in ModeBase |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK073013 | 1e-135 | AK073013.1 Oryza sativa Japonica Group cDNA clone:J033000B16, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022683500.1 | 0.0 | protein FEZ | ||||
TrEMBL | A0A3L6PQ10 | 0.0 | A0A3L6PQ10_PANMI; Protein FEZ-like | ||||
STRING | Si015514m | 1e-179 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3366 | 38 | 82 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G26870.1 | 9e-85 | NAC family protein |