PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zjn_sc00089.1.g00940.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ARR-B | ||||||||
Protein Properties | Length: 203aa MW: 22809.5 Da PI: 10.2104 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 21.3 | 5.9e-07 | 99 | 123 | 2 | 27 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekA 27 +r +W+ e H++Fve+v+qL G + A Zjn_sc00089.1.g00940.1.am.mk 99 KRFQWSGERHRKFVEVVKQL-GMDSA 123 799*****************.77776 PP | |||||||
2 | Response_reg | 25 | 9.5e-10 | 12 | 86 | 1 | 75 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH...ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEE CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd...pDlillDiempgmdGlellkeireeepklpii 75 vl vdD+ + ++l+ + l++ +y +v++a ++e ale+l++++ D + + mp+mdG++ll+ + e+++p+i Zjn_sc00089.1.g00940.1.am.mk 12 VLAVDDDGVSLMLISRQLQHCKY-NVTTAMHAEMALEILRARRdhgADQFHM-VHMPEMDGFKLLEIV-SLEMDIPVI 86 799********************.***************8888777776666.79*********9754.445577776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF52172 | 2.85E-12 | 8 | 86 | IPR011006 | CheY-like superfamily |
Gene3D | G3DSA:3.40.50.2300 | 1.5E-14 | 9 | 99 | No hit | No description |
PROSITE profile | PS50110 | 12.751 | 11 | 141 | IPR001789 | Signal transduction response regulator, receiver domain |
Pfam | PF00072 | 1.3E-6 | 12 | 86 | IPR001789 | Signal transduction response regulator, receiver domain |
CDD | cd00156 | 3.94E-9 | 13 | 86 | No hit | No description |
Gene3D | G3DSA:1.10.10.60 | 8.4E-7 | 100 | 125 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0000160 | Biological Process | phosphorelay signal transduction system | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence Send to blast |
MDADEFRSRL RVLAVDDDGV SLMLISRQLQ HCKYNVTTAM HAEMALEILR ARRDHGADQF 60 HMVHMPEMDG FKLLEIVSLE MDIPVIRKDK KKTSAPKRKR FQWSGERHRK FVEVVKQLGM 120 DSASSNPFAR LNSSAAFGKQ SLLPTQSVQL MTQRNLGNPL KDMGPVGYGG NMPQVAAPGS 180 HHTMCLLVEL KVAQLISKQL VSN |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021305574.1 | 5e-33 | two-component response regulator ORR25 |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP12043 | 4 | 6 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16857.1 | 1e-21 | response regulator 1 |