PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00072.1.g00920.1.cf.mkhc

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

GeBP

Protein Properties

Length: 288aa MW: 31700.9 Da PI: 10.0377

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00072.1.g00920.1.cf.mkhc	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	39	2.3e-12	64	149	6	97
DUF573 6 lwseeDeivlLqGlidfkaktgkspsddidafyefvkksis.fkvsksqlveKirrLKkKfkkkvkkaksgkepsfske 83 ws++D i +L +l +++g ++ + v++s++ + s s+l eK+rrLK++++k v+k + s++ Zjn_sc00072.1.g00920.1.cf.mkhc 64 AWSNKDSIKILEALAAHVQSEGR--LPKTNFLLAAVRDSLDrKDCSYSDLYEKVRRLKERYEKTVSK-----GILPSEK 135 6**************999995..567899*****83579******************.....5556677 PP DUF573 84 hdqkifelskkiWg 97 ++ ++++lsk iWg Zjn_sc00072.1.g00920.1.cf.mkhc 136 DELQMYHLSKAIWG 149 7889*******8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	3.6E-17	64	149	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence Send to blast
AELGKVAPEA SHKEKKAKGE PKKPEPEATP SGKAKKPGGK PEKSGLDSTQ PLSKSENSAR 60 APCAWSNKDS IKILEALAAH VQSEGRLPKT NFLLAAVRDS LDRKDCSYSD LYEKVRRLKE 120 RYEKTVSKGI LPSEKDELQM YHLSKAIWGD KAKGAIAASA TQNVSTATKS NKGQDNKEKM 180 DGSSRGGTSK DATHKEKAEI GARMLQGMRR SSDELQNLYP SLAWSVETMV LQHSCGETLK 240 RGFEFIDDQK ANAFESKIEK QRISEVKVQL RRADISKEVL KMLNASAD

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A0A9CL49	4e-58	A0A0A9CL49_ARUDO; Uncharacterized protein
STRING	Pavir.Ab01142.1.p	1e-59	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP7289	27	37