PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00071.1.g00500.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family Nin-like
Protein Properties Length: 131aa    MW: 15253.7 Da    PI: 11.0006
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00071.1.g00500.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK40.17.4e-1313551052
                        RWP-RK 10 lskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52
                                  + +  ++++kdAA eLg+    LK  C  +G++RWP  k++sl
  Zjn_sc00071.1.g00500.1.am.mk 13 VLAVLHMHLKDAADELGITICHLKFVCHSNGLHRWPGKKVRSL 55
                                  55678************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151911.752175IPR003035RWP-RK domain
PfamPF020421.2E-101255IPR003035RWP-RK domain
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    Send to blast
MPRRGPSPPW SDVLAVLHMH LKDAADELGI TICHLKFVCH SNGLHRWPGK KVRSLNARLD  60
RLIREAAMDQ TSLGALPRWA DHRRRTLSKI AQVIRELDNI YERIRNPVPE LPAPEPEFDR  120
QGWSVRRYPR K
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1844359
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24020.13e-07NIN like protein 7