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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Zjn_sc00069.1.g03010.1.am.mk |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
GATA |
| Protein Properties |
Length: 350aa MW: 37231.6 Da PI: 8.7489 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zjn_sc00069.1.g03010.1.am.mk | genome | ZGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 48.4 | 1.3e-15 | 178 | 211 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
Cs C+ttkTplW +gp g+k+LCnaCG+++rk +
Zjn_sc00069.1.g03010.1.am.mk 178 CSDCNTTKTPLWTSGPCGPKSLCNACGIRQRKAR 211
*******************************987 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0007623 | Biological Process | circadian rhythm |
| GO:0009416 | Biological Process | response to light stimulus |
| GO:0009740 | Biological Process | gibberellic acid mediated signaling pathway |
| GO:0009910 | Biological Process | negative regulation of flower development |
| GO:0010187 | Biological Process | negative regulation of seed germination |
| GO:0010255 | Biological Process | glucose mediated signaling pathway |
| GO:0010380 | Biological Process | regulation of chlorophyll biosynthetic process |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 350 aa
Download sequence Send
to blast |
MSAIYMSQLS TALPLMEGDH HHQGHFQDFT LPKDPPILFP FMIGSSSSGD SGLSYGSPDH 60
HLMSQQQAML EPRHMIGGSS AAFVFTAPFP TVESIRDRDD MIEPSSYDPY DMGKLHIGGG 120
PIEAAGAGNW TPPAKMRITR KASADPGAGG MAVKKPRRRA QAYEDMSSPT NLGVIRVCSD 180
CNTTKTPLWT SGPCGPKSLC NACGIRQRKA RRAMTSAGAV SAESVRAATA TSSDAAAMAV 240
HLKVKKEKRA HVDRSLPFKK RCKVVQDHAA VPVAPVRAAD KTAAEVADSA LSGGLVENIE 300
LISWSRPSPS QPATTACRSF LPAPALPVQH DEITDAAMLL MTLSCGLVRS
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters (By similarity). Influences the expression of nuclear encoded chloroplast-targeted genes. Regulates chloroplast development and promotes chlorophyll accumulation. Modulates plant architecture (e.g. height, length and width of leaf blades, and flowering tillers production) and represses tillering, probably by modulating number of cells. Promotes senescence. Involved in grain filling, panicle development and starch production (PubMed:23548780). {ECO:0000250|UniProtKB:Q9SZI6, ECO:0000269|PubMed:23548780}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by light, nitrogen, and cytokinin (benzyladenine) treatments, but repressed by darkness and gibberellin (GA). {ECO:0000269|PubMed:23548780}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | BT033679 | 2e-44 | BT033679.1 Zea mays full-length cDNA clone ZM_BFc0123C20 mRNA, complete cds. |
| GenBank | BT064595 | 2e-44 | BT064595.1 Zea mays full-length cDNA clone ZM_BFc0188D02 mRNA, complete cds. |
| GenBank | EU955555 | 2e-44 | EU955555.1 Zea mays clone 1536888 GATA transcription factor 20 mRNA, complete cds. |
| GenBank | KJ728051 | 2e-44 | KJ728051.1 Zea mays clone pUT6197 C2C2-GATA transcription factor (GATA29) mRNA, partial cds. |
