PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00069.1.g02260.1.sm.mkhc
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family HB-other
Protein Properties Length: 324aa    MW: 36139.8 Da    PI: 4.6202
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00069.1.g02260.1.sm.mkhcgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox30.65.9e-10259309353
                                     --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
                        Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 
                                      R +++k qle+Le+++ +++ p+ +++  + + ++L+ + +  WF  rR 
  Zjn_sc00069.1.g02260.1.sm.mkhc 259 ARKRLKKVQLETLERVYLRSKRPTNTMISSIVQVTNLPRKTIVKWFEDRRE 309
                                     58999********************************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007110.236254310IPR001356Homeobox domain
SMARTSM003896.8E-4256318IPR001356Homeobox domain
SuperFamilySSF466895.01E-10257311IPR009057Homeodomain-like
CDDcd000867.75E-9257308No hitNo description
PfamPF000461.5E-7259309IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.601.0E-8259309IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0002229Biological Processdefense response to oomycetes
GO:0009414Biological Processresponse to water deprivation
GO:0009682Biological Processinduced systemic resistance
GO:0009787Biological Processregulation of abscisic acid-activated signaling pathway
GO:0010118Biological Processstomatal movement
GO:0050832Biological Processdefense response to fungus
GO:2000022Biological Processregulation of jasmonic acid mediated signaling pathway
GO:2000071Biological Processregulation of defense response by callose deposition
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    Send to blast
MATVLLPLAT PVSSAAPRTS ISSAPCPAPF LGTRAHLGLR LRDSPRGVAC ALRRRPTKYK  60
TKIQNEDVAA EDEMDNEDED NALEALFKQL EEDLENDDLS VDNDEDEISE EDMAMFEQEL  120
AEAIGDVGGA EESAGDLFSG FGESGSDENV RRVQPELKSW QLRRLARALK IGRRKTSIKN  180
LAAELGLDRA LVIELLRNPP PKLLLMSDSL PDEAPSKPEV KDAEPSSSAI VDGAEASHAT  240
EIKPETELPI HIRSAEWSAR KRLKKVQLET LERVYLRSKR PTNTMISSIV QVTNLPRKTI  300
VKWFEDRREQ DGLFSSDMFA MNWY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1258266ARKRLKKVQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004965959.11e-143protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3 isoform X2
TrEMBLA0A0A9IZX91e-148A0A0A9IZX9_ARUDO; Uncharacterized protein
STRINGSi006856m1e-143(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP107003542
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11270.17e-55overexpressor of cationic peroxidase 3