PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00069.1.g02050.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family MYB_related
Protein Properties Length: 284aa    MW: 30987 Da    PI: 11.2622
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00069.1.g02050.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.14.1e-1367109648
                                   HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
               Myb_DNA-binding   6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                                   +eEd+ l d+v+++G g+W++     g+ R++k+c++rw ++l
  Zjn_sc00069.1.g02050.1.am.mk  67 PEEDKVLRDYVEEHGEGNWNRLRDNAGLDRCGKSCRLRWTNHL 109
                                   7***************************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.44458113IPR017930Myb domain
SMARTSM007171.4E-661111IPR001005SANT/Myb domain
SuperFamilySSF466897.77E-2067138IPR009057Homeodomain-like
CDDcd001676.18E-1067109No hitNo description
PfamPF002491.8E-1167109IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.6E-1967120IPR009057Homeodomain-like
PROSITE profilePS500905.122110141IPR017877Myb-like domain
SMARTSM007172.4114188IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.607.8E-7121143IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    Send to blast
MKQHNRTSIR GLASSGGRLV AGRTSGAARE QSGGVGYQRL SEAALPPPPE TRRWGEIHPA  60
TAPSAMPEED KVLRDYVEEH GEGNWNRLRD NAGLDRCGKS CRLRWTNHLK PGLRKGPFDK  120
EEVDKILRMH KKWGNKWASM AMRQFLQPAS TFPSGINGFC SFRDLIHGLI CYRDPATVRK  180
RHTCWAAPSA RRTATGRRDA ITGRQTGARR SRTISRAAVS VAAHVIGYPV GRSRSTDLLS  240
ASAARRSHLG HESGPPGTGS ILTDAAPAST EPKGKEKAVL DSNA
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP4608633
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11440.14e-27myb domain protein 65