PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zjn_sc00069.1.g00440.1.sm.mkhc | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | bZIP | ||||||||
Protein Properties | Length: 170aa MW: 19051.8 Da PI: 8.904 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 20.7 | 9.2e-07 | 84 | 123 | 24 | 63 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 24 KkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +++++ e ++ v +L+ eN+aL++e++ l+k + +l +e+ Zjn_sc00069.1.g00440.1.sm.mkhc 84 RQKRLPEIQQMVRSLSVENDALRQEMKALQKACTALSKEN 123 67788888999*************************9987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 8.6E-4 | 82 | 120 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 170 aa Download sequence Send to blast |
MRPVSLSTPV VRWTIPGWPL WTPIDPAGTT GWPRRTAAAE EDGELLLLFN HSRNLLNGIR 60 NQTTMLSNTA SLCIPIIYAS TQARQKRLPE IQQMVRSLSV ENDALRQEMK ALQKACTALS 120 KENGKLETRL DQSNKREEKK EKPQPDQCAA KQEVQNGFAL PDLNLPAHDA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 134 | 141 | KREEKKEK |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | FP098002 | 2e-46 | FP098002.1 Phyllostachys edulis cDNA clone: bphyem125k10, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015644355.1 | 6e-32 | uncharacterized protein LOC4341662 | ||||
STRING | OPUNC06G20480.1 | 3e-32 | (Oryza punctata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3790 | 29 | 51 |