PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00067.1.g01060.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 777aa    MW: 84323.8 Da    PI: 9.965
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00067.1.g01060.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM132.43.2e-41131432127
                           NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknrat 78 
                                   ppGfrF Pt+eel+ +yL+++++g++ ++e++i+ vdiy+++P+dL++    +  ++ ++w+fF++r++++ +g r+ r+t
  Zjn_sc00067.1.g01060.1.am.mk  13 PPGFRFYPTEEELLGFYLRQRLAGTRPDVERFIPVVDIYSYHPRDLQSlagaANVSDPEQWFFFCPRAERELHGGRPARTT 93 
                                   9****************************999**************9545532223556********************** PP

                           NAM  79 ksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127
                                    sgyWkatg+   v+s+  ++++g k+t+vfy+grap+g+kt+W m+ey+
  Zjn_sc00067.1.g01060.1.am.mk  94 PSGYWKATGSPSWVFSSsANRVIGEKRTMVFYQGRAPTGTKTRWKMNEYK 143
                                   ***************9867788***************************8 PP
2bZIP_127.95.1e-09690752163
                                   XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                                   eke kr rr   NRe+Ar   +R++a  +eL++kv+ L+++N+++kke ++   e+ +lk  +
  Zjn_sc00067.1.g01060.1.am.mk 690 EKEAKRLRRVLANRESARQTILRRQAIRDELARKVADLSSQNESMKKEKDMVMREYLSLKEAN 752
                                   89*********************************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.22E-4510170IPR003441NAC domain
PROSITE profilePS5100548.04412171IPR003441NAC domain
PfamPF023657.0E-2213143IPR003441NAC domain
Gene3DG3DSA:1.20.5.1702.2E-5688755No hitNo description
PfamPF001701.8E-7690753IPR004827Basic-leucine zipper domain
SMARTSM003382.3E-12690754IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.174692755IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.48E-6694750No hitNo description
CDDcd147021.11E-13695745No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 777 aa     Download sequence    Send to blast
METTGGGVDP IFPPGFRFYP TEEELLGFYL RQRLAGTRPD VERFIPVVDI YSYHPRDLQS  60
LAGAANVSDP EQWFFFCPRA ERELHGGRPA RTTPSGYWKA TGSPSWVFSS SANRVIGEKR  120
TMVFYQGRAP TGTKTRWKMN EYKAVADPAV TVAVVPPRLR NEFSVCRVYI STGTLRSFDR  180
RPLNHADIHH HHQLVLPPPA ANTGSTQPFG GDVVANGNGQ TETSRDSSSF GSRGMVVDGD  240
NAIDWDSLMI PLADDGLSFS AEGLARASER NAHDTHTWPR KARPIEITII GNLPKQTGSG  300
PSPSAARRRK GSTAACPHRR ARARHDHRAE LFSTVGSDPG SAAPRAQTVG SDPGSAASYQ  360
SVGFRACTAL SVRPWPAHRH TLSLMWPSAR NTPNKRVPRR RVNPAYWSLA HARQTPTCAA  420
AAAAAAAADR PITLSSEPRR PATIHASGPH VVTVVAGVRR GDMIVYCARQ AGTPRLSPSL  480
QFTPPIPSGR SSAVPAGRYG GLHPHGGVAR LYGHVAAADG RDGPPPGPSD ARREVPEDHL  540
SCPPAPARTA SGNQIFNLRS LEIEIDRCQS PVMSEDSDGQ RPCRRGVNVH ELDAAMALAD  600
MAGVGPDQQQ QQQPQPPPAV PQAEREDEEL ASTRLSLELG KVGIQSSPCS SSSSAGHHHP  660
APQQQPPLMP AAAAVSGYGP RPRHMLTEAE KEAKRLRRVL ANRESARQTI LRRQAIRDEL  720
ARKVADLSSQ NESMKKEKDM VMREYLSLKE ANKQLKEQAD LSLSVLALIH PSSSCYL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A4e-27916913166NAC domain-containing protein 19
3swm_B4e-27916913166NAC domain-containing protein 19
3swm_C4e-27916913166NAC domain-containing protein 19
3swm_D4e-27916913166NAC domain-containing protein 19
3swp_A4e-27916913166NAC domain-containing protein 19
3swp_B4e-27916913166NAC domain-containing protein 19
3swp_C4e-27916913166NAC domain-containing protein 19
3swp_D4e-27916913166NAC domain-containing protein 19
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP100538140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.12e-59NAC domain containing protein 90