PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00067.1.g00980.1.sm.mkhc

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 478aa MW: 52092.6 Da PI: 7.5531

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00067.1.g00980.1.sm.mkhc	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	36.6	9.8e-12	159	191	2	34
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeek 34 +lk rr+++NReAAr+sR+RKka+i++Le Zjn_sc00067.1.g00980.1.sm.mkhc 159 TQLKTIRRLAQNREAARKSRLRKKAYIQQLESS 191 5799**************************963 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	4.6E-6	158	221	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	4.8E-9	159	191	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	8.714	160	204	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	4.58E-7	162	196	No hit	No description
Gene3D	G3DSA:1.20.5.170	7.1E-8	162	203	No hit	No description
PROSITE pattern	PS00036	0	165	180	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	7.0E-28	242	315	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 478 aa Download sequence Send to blast
MGETSSSTSH PRQDPCVLGS YGFHGAMGNN SAPPASFFDQ EGTTYFGELE EALMHQVATF 60 GTQQAVGAST AHHGHLHNST STFHAAATAA AAATVTARLP PTLDIFPSWP MRSLDTPKAG 120 SNVTADSTDS ASSSKNTSNH SSDQHGAAAN MASPQQQQTQ LKTIRRLAQN REAARKSRLR 180 KKAYIQQLES SKVKLAQMEQ DIQRARAQGL LLGGAPGANT SSGAAMFDLE YARWLEDYGR 240 RMAELHGALH AHLPDGELRA IVDDTLTHHD ELCRLKAQAA RSDVFHLITG VWVSPAERCY 300 LWMGGFRPSD LLKTLLPQLD PLTEQQVVGI CNLQQSSQQA EEALSQGLEQ LHQSLASTMA 360 GGSVTDDPNT SFMSQMAHAL NKLSNLEGFV IQADNLRQQT LHQMHRILTV RQAARCFLAI 420 GEYHNRLRAL SSLWASRPRE ILVTDEGNCG ELSMVQKTLG PSKALVKGQM LRLEITRK

Sequence ? help Back to Top

Protein Sequence Length: 478 aa Download sequence Send to blast

MGETSSSTSH PRQDPCVLGS YGFHGAMGNN SAPPASFFDQ EGTTYFGELE EALMHQVATF  60
GTQQAVGAST AHHGHLHNST STFHAAATAA AAATVTARLP PTLDIFPSWP MRSLDTPKAG  120
SNVTADSTDS ASSSKNTSNH SSDQHGAAAN MASPQQQQTQ LKTIRRLAQN REAARKSRLR  180
KKAYIQQLES SKVKLAQMEQ DIQRARAQGL LLGGAPGANT SSGAAMFDLE YARWLEDYGR  240
RMAELHGALH AHLPDGELRA IVDDTLTHHD ELCRLKAQAA RSDVFHLITG VWVSPAERCY  300
LWMGGFRPSD LLKTLLPQLD PLTEQQVVGI CNLQQSSQQA EEALSQGLEQ LHQSLASTMA  360
GGSVTDDPNT SFMSQMAHAL NKLSNLEGFV IQADNLRQQT LHQMHRILTV RQAARCFLAI  420
GEYHNRLRAL SSLWASRPRE ILVTDEGNCG ELSMVQKTLG PSKALVKGQM LRLEITRK

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in defense response. {ECO:0000250\|UniProtKB:Q7X993}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00131	DAP	Transfer from AT1G08320	Download

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025828229.1	0.0	transcription factor TGAL4-like isoform X1
Swissprot	Q53Q70	0.0	TGAL4_ORYSJ; Transcription factor TGAL4
TrEMBL	A0A2T7E565	0.0	A0A2T7E565_9POAL; Uncharacterized protein
STRING	Sb05g003240.1	0.0	(Sorghum bicolor)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4444	36	70

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08320.2	1e-115	bZIP family protein

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Chern M, et al. Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins. BMC Genomics, 2014. 15: p. 461 [PMID:24919709] Miyamoto K, et al. Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells. J. Plant Physiol., 2015. 173: p. 19-27 [PMID:25462074]