PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zjn_sc00066.1.g01290.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 490aa MW: 53881.9 Da PI: 8.4778 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 159.8 | 1.1e-49 | 10 | 135 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 lppGfrF P+deelv++yL++kv++ + v+ evd++++ePw+Lp +k +++ewyfFs rd+kyatg r+nratksg Zjn_sc00066.1.g01290.1.am.mk 10 LPPGFRFFPSDEELVCHYLHNKVANAS----GVMVEVDLHTHEPWELPDVAKLSTNEWYFFSFRDRKYATGLRTNRATKSG 86 79**********************998....5789*************87788999************************* PP NAM 82 yWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 yWkatgkd+ +++ ++++vg++ktLvfy+grap+g kt+Wvmhe+r+ Zjn_sc00066.1.g01290.1.am.mk 87 YWKATGKDRIIHNPkaGRAVVGMRKTLVFYRGRAPNGIKTNWVMHEFRM 135 ***********998777888***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 8.24E-60 | 7 | 154 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 57.82 | 10 | 154 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.3E-27 | 11 | 135 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 490 aa Download sequence Send to blast |
MGLRDIELTL PPGFRFFPSD EELVCHYLHN KVANASGVMV EVDLHTHEPW ELPDVAKLST 60 NEWYFFSFRD RKYATGLRTN RATKSGYWKA TGKDRIIHNP KAGRAVVGMR KTLVFYRGRA 120 PNGIKTNWVM HEFRMENPHT PPKEDWVLCR VFYKKKADAL DYSMDNEQEI ALARSAVASG 180 KYSSSSGPGY SPPFPSLGGT HYQLPPSSDH HSSLIDFSAM ALLQHNSIFD FHAHQPLNSG 240 SSVLAAAGGS RDGGEQCGGG TLMDLGLEEH YSYNSMLQMY SAVLETTGYL GYLGVGTGSP 300 ERPGARDEHR PPDACACAVL PPARVFFSPS SCSFCMATLN RFGIFGHITQ LYVDPSISPR 360 IVDQAKSGLV LHVHVGLHSS STHTPPTIPE SSPQRRGPAH LPSIHPSAAF HGNTPLVSWH 420 SCNARKRHDE AALRSKAITT TRTQTGPTSP PPTLPSSVAC AHRLLLIDRP SEPNRVVTPI 480 ERSPLRMITD |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 3e-47 | 1 | 159 | 4 | 169 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 3e-47 | 1 | 159 | 4 | 169 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 3e-47 | 1 | 159 | 4 | 169 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 3e-47 | 1 | 159 | 4 | 169 | NO APICAL MERISTEM PROTEIN |
3swm_A | 3e-47 | 1 | 159 | 7 | 172 | NAC domain-containing protein 19 |
3swm_B | 3e-47 | 1 | 159 | 7 | 172 | NAC domain-containing protein 19 |
3swm_C | 3e-47 | 1 | 159 | 7 | 172 | NAC domain-containing protein 19 |
3swm_D | 3e-47 | 1 | 159 | 7 | 172 | NAC domain-containing protein 19 |
3swp_A | 3e-47 | 1 | 159 | 7 | 172 | NAC domain-containing protein 19 |
3swp_B | 3e-47 | 1 | 159 | 7 | 172 | NAC domain-containing protein 19 |
3swp_C | 3e-47 | 1 | 159 | 7 | 172 | NAC domain-containing protein 19 |
3swp_D | 3e-47 | 1 | 159 | 7 | 172 | NAC domain-containing protein 19 |
4dul_A | 3e-47 | 1 | 159 | 4 | 169 | NAC domain-containing protein 19 |
4dul_B | 3e-47 | 1 | 159 | 4 | 169 | NAC domain-containing protein 19 |
Search in ModeBase |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK060976 | 1e-104 | AK060976.1 Oryza sativa Japonica Group cDNA clone:006-202-E09, full insert sequence. | |||
GenBank | AK070982 | 1e-104 | AK070982.1 Oryza sativa Japonica Group cDNA clone:J023075A01, full insert sequence. | |||
GenBank | CT830250 | 1e-104 | CT830250.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA121I23, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004954303.1 | 1e-154 | NAC domain-containing protein 92 | ||||
TrEMBL | K3YUM1 | 1e-152 | K3YUM1_SETIT; Uncharacterized protein | ||||
STRING | Si017967m | 1e-153 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP697 | 38 | 166 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28530.1 | 1e-77 | NAC domain containing protein 74 |