PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00063.1.g01690.1.sm.mkhc
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 266aa    MW: 30337.2 Da    PI: 8.0973
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00063.1.g01690.1.sm.mkhcgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM169.79.3e-5391421128
                             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknra 77 
                                     lp GfrFhPtdeelv +yLk+k++g+  +++evi+e+d++k+ePwdLp k  +++++ ew+fF+++d+ky++g+r+nra
  Zjn_sc00063.1.g01690.1.sm.mkhc   9 LPLGFRFHPTDEELVRHYLKRKITGQISSEAEVIPEIDVCKCEPWDLPvKsLIRSDDPEWFFFAPKDRKYPNGSRSNRA 87 
                                     699************************9999*****************6346667888********************* PP

                             NAM  78 tksgyWkatgkdkevlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                     t++gyWkatgkd+ ++sk    k++ +g+kktLvf+kgrapkge+  W+mheyr 
  Zjn_sc00063.1.g01690.1.sm.mkhc  88 TEAGYWKATGKDRVIKSKgdkrKQHIIGMKKTLVFHKGRAPKGERMGWIMHEYRT 142
                                     *****************987666666***************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.71E-583163IPR003441NAC domain
PROSITE profilePS5100556.4529163IPR003441NAC domain
PfamPF023651.1E-2810141IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
MTVMELRALP LGFRFHPTDE ELVRHYLKRK ITGQISSEAE VIPEIDVCKC EPWDLPVKSL  60
IRSDDPEWFF FAPKDRKYPN GSRSNRATEA GYWKATGKDR VIKSKGDKRK QHIIGMKKTL  120
VFHKGRAPKG ERMGWIMHEY RTTEPEFECG EQGGYVLYRL FRKQEEKTER SSPEEMDKSG  180
YSPTPSRSSP DNIEANEEAF TALNKESPES TIHDSPINLP NSVEAHDVSL TRWLADRNDN  240
VAANAVNVSQ MSLSGHINGI AKVRTT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A3e-48816419169NAC domain-containing protein 19
3swm_B3e-48816419169NAC domain-containing protein 19
3swm_C3e-48816419169NAC domain-containing protein 19
3swm_D3e-48816419169NAC domain-containing protein 19
3swp_A3e-48816419169NAC domain-containing protein 19
3swp_B3e-48816419169NAC domain-containing protein 19
3swp_C3e-48816419169NAC domain-containing protein 19
3swp_D3e-48816419169NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP). {ECO:0000250|UniProtKB:Q949N0}.
UniProtTranscriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP) (PubMed:18443413, PubMed:24329768). Calmodulin-regulated transcriptional repressor. Binds several synthetic promoters with randomly selected binding sites (PubMed:17947243). Functions synergistically with SNI1 as negative regulator of pathogen-induced PR1 expression and basal resistance to a virulent strain of P.syringae. Binds directly to the promoter of the PR1 gene (PubMed:22826500). Acts as positive regulator of innate immunity. Involved in the effector-triggered immunity (ETI) induction of immunity-related gene expression (PubMed:24329768). Mediates osmotic stress signaling in leaf senescence by up-regulating senescence-associated genes (PubMed:18443413). {ECO:0000269|PubMed:17947243, ECO:0000269|PubMed:18443413, ECO:0000269|PubMed:22826500, ECO:0000269|PubMed:24329768}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By cold, heat and drought stresses. {ECO:0000269|PubMed:17158162}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025820792.11e-161protein NTM1-like 9
SwissprotB5X5707e-72NAC14_ARATH; NAC domain-containing protein 14
SwissprotF4JN351e-72NTL9_ARATH; Protein NTM1-like 9
TrEMBLA0A0A9CTY01e-166A0A0A9CTY0_ARUDO; Uncharacterized protein
STRINGSi013369m1e-161(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP51723859
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.17e-75NAC transcription factor-like 9
Publications ? help Back to Top
  1. Zheng XY, et al.
    Spatial and temporal regulation of biosynthesis of the plant immune signal salicylic acid.
    Proc. Natl. Acad. Sci. U.S.A., 2015. 112(30): p. 9166-73
    [PMID:26139525]
  2. Guo T, et al.
    Lamin-like Proteins Negatively Regulate Plant Immunity through NAC WITH TRANSMEMBRANE MOTIF1-LIKE9 and NONEXPRESSOR OF PR GENES1 in Arabidopsis thaliana.
    Mol Plant, 2017. 10(10): p. 1334-1348
    [PMID:28943325]