PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zjn_sc00062.1.g00160.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | HB-other | ||||||||
Protein Properties | Length: 257aa MW: 27206.2 Da PI: 10.5314 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 14.5 | 6.2e-05 | 159 | 186 | 18 | 45 |
HHHHSSS--HHHHHHHHHHCTS-HHHHH CS Homeobox 18 lFeknrypsaeereeLAkklgLterqVk 45 F+ + +p+ e+r LA+k+g++ +qVk Zjn_sc00062.1.g00160.1.am.mk 159 SFKWCAHPDDEARMALAMKIGMEPTQVK 186 79999**********************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00086 | 0.00443 | 157 | 186 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence Send to blast |
LSSLPVHALD RLPSHDRHSA HARIHLEKKA LLVVTLISRK GPPLSSPQEL YATPPLTGSR 60 PPSPSHPPPL DGPSLPPPAT PLVAAALPSP AAPLVGPTIH PLAGPPSPSP ASRPHPTSLG 120 RSPRPSLSSS PSRPLTGPRP PSTSCPPHHR PRPPPHKHSF KWCAHPDDEA RMALAMKIGM 180 EPTQVKHLSM MTQPVTPSST STHRSRLQLP ELDTVAQTDA GLPKVNMTTG DDAMVGLDDP 240 TVMTFKPLNA CSQLQSS |