PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00060.1.g00770.1.am.mk

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Dof

Protein Properties

Length: 432aa MW: 44293.5 Da PI: 8.4354

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00060.1.g00770.1.am.mk	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123	1e-38	121	179	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +al+cprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+s Zjn_sc00060.1.g00770.1.am.mk 121 AEALRCPRCDSANTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRS 179 57899****************************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	8.0E-31	118	178	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	2.2E-33	123	178	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.385	124	178	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	126	162	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0048364	Biological Process	root development
GO:0005634	Cellular Component	nucleus
GO:0044212	Molecular Function	transcription regulatory region DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence Send to blast
MQDCETCVHT VQCRHGGRER RRRRRSPLLE HDFHAPAASY SGSSSAGRPD CCCPSATELV 60 DTKLPVRPVR HCTVSSAQDD AVPGHQAASE LMAKRRDRVP SFFLIASSSA AAIKLGADPR 120 AEALRCPRCD SANTKFCYYN NYSLSQPRHF CKACKRYWTR GGTLRNVPVG GGCRKNKRSR 180 TSAAGIGAAG RTVSSASAAA AAGTSSSAAS ALSLPPPAGG SSMQSLTSAL GLSGGASLAS 240 LLLGNGGGGS GADHLGLFHA AMQSVVSDTS AYEMQQQTQV DHLLGLGYGG GGAGAQIQLK 300 PWLQDAGAGA GGIMDTFYAP LLSRSIVPGL EELHVKAEAA GAGEPQQAKA AAAWEQNSWE 360 LPTPSSTSNI VASDGLMAAA ASTMNNPAVS STASTATAAP SSFMYWANDG IGGAAASWPD 420 LANCGSSIAT LF

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence Send to blast

MQDCETCVHT VQCRHGGRER RRRRRSPLLE HDFHAPAASY SGSSSAGRPD CCCPSATELV  60
DTKLPVRPVR HCTVSSAQDD AVPGHQAASE LMAKRRDRVP SFFLIASSSA AAIKLGADPR  120
AEALRCPRCD SANTKFCYYN NYSLSQPRHF CKACKRYWTR GGTLRNVPVG GGCRKNKRSR  180
TSAAGIGAAG RTVSSASAAA AAGTSSSAAS ALSLPPPAGG SSMQSLTSAL GLSGGASLAS  240
LLLGNGGGGS GADHLGLFHA AMQSVVSDTS AYEMQQQTQV DHLLGLGYGG GGAGAQIQLK  300
PWLQDAGAGA GGIMDTFYAP LLSRSIVPGL EELHVKAEAA GAGEPQQAKA AAAWEQNSWE  360
LPTPSSTSNI VASDGLMAAA ASTMNNPAVS STASTATAAP SSFMYWANDG IGGAAASWPD  420
LANCGSSIAT LF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	19	24	RRRRRR

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025803596.1	1e-123	dof zinc finger protein 2-like
TrEMBL	A0A2T7EWI5	1e-122	A0A2T7EWI5_9POAL; Uncharacterized protein
STRING	Traes_2BS_C94BD2E9F.1	1e-116	(Triticum aestivum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP8895	30	41

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	2e-35	TARGET OF MONOPTEROS 6