PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00059.1.g00490.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family Trihelix
Protein Properties Length: 570aa    MW: 62397.4 Da    PI: 11.8437
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00059.1.g00490.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix70.14e-22315404186
                      trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm......rergferspkqCkekwenlnkrykkikegekkrtses 75 
                                   +Wt++e+laLiea+r+++e+lr+g+l++++W++v++++        +   ++ +qC++k+e+l+kry+++++++++r+++ 
  Zjn_sc00059.1.g00490.1.am.mk 315 CWTHEETLALIEAYRDRWESLRKGNLRAADWDDVAEAVtnrcgrFPTATPKTGVQCRHKIEKLRKRYRAERARSSGRSKG- 394
                                   8*************************************999988888899*************************98443. PP

                      trihelix  76 sstcpyfdqle 86 
                                     ++p++  l+
  Zjn_sc00059.1.g00490.1.am.mk 395 -PKWPFYPLLH 404
                                   .47****9886 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138374.1E-22314405No hitNo description
PROSITE profilePS500906.098316378IPR017877Myb-like domain
SMARTSM005954.6E-6323411IPR006578MADF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 570 aa     Download sequence    Send to blast
MTWLSSVRFL PPQREPIRTY HHHEALLGVL APPNPSGDKL SKPLIDKLHI VAEQHLEGFL  60
LRPLALGPLA VSPPHKDAHG KVRSVRGGDR RAERRAGGRP GARLSSFRAR TCDATAAARP  120
ARGGIIKRVI RSAWGWHPPT RVPAAGRPRP TGKRRGGAAA TTHPPRPDTA HGHRGTALRT  180
MRRRGLILIP LIRRTPRLRD KPLSITAAPL RPPRTRRCPV PLPLPSRSFQ RAAHTRGPPP  240
HRLPPPPYYD RRVRRRRRSA MSSSSSDPAR DDAVSSPDLP PLGLPGAAAA AAAAAASSGG  300
GMLGGGSGRR LPPPCWTHEE TLALIEAYRD RWESLRKGNL RAADWDDVAE AVTNRCGRFP  360
TATPKTGVQC RHKIEKLRKR YRAERARSSG RSKGPKWPFY PLLHDLAGNG APDPSPNAII  420
KIKTKGPAPP ASSPSPVSSP SSEEEAVRSR SLHGLISNGG AESGLRFTIP KASRTRPAAT  480
RVEKTSNEDD AESEAMSEVV AALRAVGEGF VRMEERRLEL SLQLEKERME SEMKRTQAML  540
DAQQLFLEAF LGKQQPPHKR ARISPTMEED
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1250257RRVRRRRR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008659928.11e-152trihelix transcription factor ASIL1
TrEMBLA0A060D1H21e-151A0A060D1H2_MAIZE; Trihelix transcription factor (Fragment)
TrEMBLA0A1X7YE921e-151A0A1X7YE92_MAIZE; Uncharacterized protein
TrEMBLA0A3L6DCX41e-151A0A3L6DCX4_MAIZE; Trihelix transcription factor ASIL2
STRINGGRMZM2G428470_P011e-151(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP56893250
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.18e-22Trihelix family protein