PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00051.1.g01780.1.sm.mk

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 494aa MW: 54312.9 Da PI: 5.1145

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00051.1.g01780.1.sm.mk	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	39.2	2.1e-12	13	147	5	128
NAM 5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..........kvkaeekewyfFskrdkkyatgkrkn 75 f F P+d lv + L++k++++++ + +++ +++++ P++L + + +++ ++yfFs+++ a+ ++++ Zjn_sc00051.1.g01780.1.sm.mk 13 FTFTPSDARLV-DSLRAKIANQEVAHAVYFSDDNVCSLRPEELVRrhgkparvnpREAGDGLQYYFFSPAHFVGASRTKRS 92 89*******.77*****888566**********744677775543222234488*999998888888 PP NAM 76 ra....tksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 r+ k+ +W+a + k+v + + L ++ + + +k W+m ey++ Zjn_sc00051.1.g01780.1.sm.mk 93 RIiegtEKKETWHAETSLKQVEG--AVDGFMMVKLSYHVKIGEIVQKPGWLMTEYSF 147 8644433478899999977..666778888988888899********86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	13.673	9	161	IPR003441	NAC domain
SuperFamily	SSF101941	3.27E-14	13	161	IPR003441	NAC domain
Pfam	PF02365	4.5E-8	13	146	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 494 aa Download sequence Send to blast
MAALGAAADD DSFTFTPSDA RLVDSLRAKI ANQEVAHAVY FSDDNVCSLR PEELVRRHGK 60 PARVNPREAG DGLQYYFFSP AHFVGASRTK RSRIIEGTEK KETWHAETSL KQVEGAVDGF 120 MMVKLSYHVK IGEIVQKPGW LMTEYSFKGA GDTVLCKIYK SPRGPGRSKA PSSSSAGKRK 180 AEDDLEGETS SMRQRHENVA APEFAEHVEE SQPEPQIAPA TFEFDGNITF TLEELTNFPT 240 GDVHTGFGVL TDGESIAAYA SGGTIDELIP STMEEVQPES EVPPASTDGS MTFEELWQLL 300 DTDVVDDGAY LQLPADEILA EEWLKDKETL QHVHIDRAAG DAMMFLQRSR PLTPASARRP 360 RSCPGRRLLV PQHQAPYLRL PAWLRQLLLP TTPQAPSHLL EKLPMHFAGA VLDGLPLQYH 420 VGRLIVARFR TGGSVSSPGA KKHVNVPEDL DRFQATAEGA ASCRRKAIEQ EAERLEAADF 480 VQGHEEGTLS LDSN

Sequence ? help Back to Top

Protein Sequence Length: 494 aa Download sequence Send to blast

MAALGAAADD DSFTFTPSDA RLVDSLRAKI ANQEVAHAVY FSDDNVCSLR PEELVRRHGK  60
PARVNPREAG DGLQYYFFSP AHFVGASRTK RSRIIEGTEK KETWHAETSL KQVEGAVDGF  120
MMVKLSYHVK IGEIVQKPGW LMTEYSFKGA GDTVLCKIYK SPRGPGRSKA PSSSSAGKRK  180
AEDDLEGETS SMRQRHENVA APEFAEHVEE SQPEPQIAPA TFEFDGNITF TLEELTNFPT  240
GDVHTGFGVL TDGESIAAYA SGGTIDELIP STMEEVQPES EVPPASTDGS MTFEELWQLL  300
DTDVVDDGAY LQLPADEILA EEWLKDKETL QHVHIDRAAG DAMMFLQRSR PLTPASARRP  360
RSCPGRRLLV PQHQAPYLRL PAWLRQLLLP TTPQAPSHLL EKLPMHFAGA VLDGLPLQYH  420
VGRLIVARFR TGGSVSSPGA KKHVNVPEDL DRFQATAEGA ASCRRKAIEQ EAERLEAADF  480
VQGHEEGTLS LDSN

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6280	15	45