PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00047.1.g02120.1.am.mk

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

BES1

Protein Properties

Length: 611aa MW: 64741.3 Da PI: 9.9583

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00047.1.g02120.1.am.mk	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	149.6	2.5e-46	151	222	1	72
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkg 72 ggs r p+w+ErEnn++RERrRRaiaaki++GLRa+Gny+lp ++DnneVl+ALc+eAGw+ve+DGttyrk Zjn_sc00047.1.g02120.1.am.mk 151 GGSVRVPSWRERENNRLRERRRRAIAAKIFTGLRAHGNYQLPRHCDNNEVLRALCNEAGWTVEPDGTTYRKV 222 6899******************************************************************85 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	3.2E-43	153	223	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 611 aa Download sequence Send to blast
MVAAQLLKRS SPSFARRDWP PPSQSCTASA LLCRRQVAWH GRWRPKPHKL DSRHMTDSHA 60 ETPERRQTGG QISIIHSLDG HSRFRWRAAY LTALAGASES LTHHSSTTTA HQREPALVGE 120 GRREEERRTM NGGGEGAAAG TGAGGSRTGG GGSVRVPSWR ERENNRLRER RRRAIAAKIF 180 TGLRAHGNYQ LPRHCDNNEV LRALCNEAGW TVEPDGTTYR KVRTLPRLSP VLLLHLRPPG 240 VLWLLRIWRV LNAADSCRAS PSSLTATYGI RARSERFLVE FFAMNPPFSG RAPCRQGPSP 300 PRVAVHAWGT ARCALRKREH HVGDCYGGDE ATVLCPGAVE HSDRVSFLLG CKPPAAGDHT 360 GIFRSGTASP CPTYPLSPLA SLNPSPTSSS SRITFGCGSS SNNFFFAGGG GSATDGGSFF 420 PWLKAVSGAG GSSSYPSYGA ASFSAPVTPP AGSSAAPPLW AAGASSSSRY ASQSYTTPHS 480 PTAGRRALAD PATWLPGFQF PASSAGGKSP VYGHAPPFGA GAGASSSRLG LPGLNSNSCP 540 RSPAAPYGGA VACRLGDDAK TAEEDAAADC SLSLEGSQAM VRAWEGEVVK ECNEEELELT 600 LGSSRTRADR A

Sequence ? help Back to Top

Protein Sequence Length: 611 aa Download sequence Send to blast

MVAAQLLKRS SPSFARRDWP PPSQSCTASA LLCRRQVAWH GRWRPKPHKL DSRHMTDSHA  60
ETPERRQTGG QISIIHSLDG HSRFRWRAAY LTALAGASES LTHHSSTTTA HQREPALVGE  120
GRREEERRTM NGGGEGAAAG TGAGGSRTGG GGSVRVPSWR ERENNRLRER RRRAIAAKIF  180
TGLRAHGNYQ LPRHCDNNEV LRALCNEAGW TVEPDGTTYR KVRTLPRLSP VLLLHLRPPG  240
VLWLLRIWRV LNAADSCRAS PSSLTATYGI RARSERFLVE FFAMNPPFSG RAPCRQGPSP  300
PRVAVHAWGT ARCALRKREH HVGDCYGGDE ATVLCPGAVE HSDRVSFLLG CKPPAAGDHT  360
GIFRSGTASP CPTYPLSPLA SLNPSPTSSS SRITFGCGSS SNNFFFAGGG GSATDGGSFF  420
PWLKAVSGAG GSSSYPSYGA ASFSAPVTPP AGSSAAPPLW AAGASSSSRY ASQSYTTPHS  480
PTAGRRALAD PATWLPGFQF PASSAGGKSP VYGHAPPFGA GAGASSSRLG LPGLNSNSCP  540
RSPAAPYGGA VACRLGDDAK TAEEDAAADC SLSLEGSQAM VRAWEGEVVK ECNEEELELT  600
LGSSRTRADR A

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	1e-19	155	221	372	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	1e-19	155	221	372	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	1e-19	155	221	372	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	1e-19	155	221	372	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AP003682	8e-70	AP003682.3 Oryza sativa Japonica Group genomic DNA, chromosome 6, PAC clone:P0427B07.
GenBank	AP003686	8e-70	AP003686.3 Oryza sativa Japonica Group genomic DNA, chromosome 6, PAC clone:P0659D09.
GenBank	AP014962	8e-70	AP014962.1 Oryza sativa Japonica Group DNA, chromosome 6, cultivar: Nipponbare, complete sequence.
GenBank	CP012614	8e-70	CP012614.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 6 sequence.

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP45386	3	3

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19350.6	6e-23	BES1 family protein