PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00045.1.g03010.1.am.mk

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Trihelix

Protein Properties

Length: 806aa MW: 87672.4 Da PI: 7.4988

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00045.1.g03010.1.am.mk	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	29.1	2.7e-09	193	271	1	70
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.........rergferspkqCkekwenlnkrykkikegekk 70 +Wt e+laL++ + +++ +r+ ++ ++W+ v++++ +r +r + +Ck +we l+ +y +++++e + Zjn_sc00045.1.g03010.1.am.mk 193 EWTPAETLALVAEVAAVDDGWSRSVSAFQKWAMVAENLaasevfasgPARRGKRAAGECKRRWEALAAEYDAVRRWEVR 271 5*****************************************999777779*********************976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50090	6.795	186	259	IPR017877	Myb-like domain
SMART	SM00220	0.0059	437	624	IPR000719	Protein kinase domain
Gene3D	G3DSA:3.30.200.20	7.0E-13	440	511	No hit	No description
Pfam	PF07714	4.1E-5	441	513	IPR001245	Serine-threonine/tyrosine-protein kinase catalytic domain
SuperFamily	SSF56112	2.28E-16	441	623	IPR011009	Protein kinase-like domain
Gene3D	G3DSA:1.10.510.10	1.1E-7	512	616	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006468	Biological Process	protein phosphorylation
GO:0004672	Molecular Function	protein kinase activity
GO:0005524	Molecular Function	ATP binding

Sequence ? help Back to Top
Protein Sequence Length: 806 aa Download sequence Send to blast
MRNALFGSVA SPTKNGIYER WEREGSVTLG FHGVDATRVL RSRSPPVWGP PLSRPASDTT 60 SARDPQGSTW LRTRAPRRTR TVSTLARASS SLPHRLTAPA PARIAPASMD PPAADSRCVV 120 QALRASSNTR PAPPPPIKSL HSPAAKDHAP GASSSSSSRP PKPKRRLPRP TALPFGPAPP 180 SPRRTRSGES APEWTPAETL ALVAEVAAVD DGWSRSVSAF QKWAMVAENL AASEVFASGP 240 ARRGKRAAGE CKRRWEALAA EYDAVRRWEV RTGGGYWKMS AAARRKAGLP SEFDAEVYGA 300 MDALVRVEEA LLANAVAGGG AGEEVEGLVG SGAGVAVGEE NRGEPEICKE QVKKDELVDE 360 VQKDESGDEE EDEDGRDDEE ATKADPGNAD ASNTIAAAAA AGGTSATGAG TGRRPRRDEL 420 VFIQEGRVRF EIEDLLRASA EVLGSGNFGS SYKATLCEGP AVVVKRFKDM NGVAREDFSE 480 HMRRLGRLTH PNLLPLVAYL YKKEEKLLVT DHISPECTAP HGKPSKKSDV WSLGILILEV 540 LTGKFPATYL GSKGRQNTDL AGWVHAAVSE ERTAEVFDKD ITGAAGAEAD MVTLLQVGLG 600 CCEADVDRRW ELKTAIARID EIPVPPETVV VGDDWSTPSL SNAGEHRSYS MICVRRARRD 660 EGTVYAAARH MHAWVGAVGR IDYWCMNDTT RDRLRRRKNL SPDDTFRARR ENVDQLVLGE 720 DEDHHHARPA GAATEMRFLI LVDIYSAFDR VAQGYCSNAA SIEWCYCYTY VRRRCLQVQY 780 WTCTLWAAYW SGRCAGHEKI VADKGG

Sequence ? help Back to Top

Protein Sequence Length: 806 aa Download sequence Send to blast

MRNALFGSVA SPTKNGIYER WEREGSVTLG FHGVDATRVL RSRSPPVWGP PLSRPASDTT  60
SARDPQGSTW LRTRAPRRTR TVSTLARASS SLPHRLTAPA PARIAPASMD PPAADSRCVV  120
QALRASSNTR PAPPPPIKSL HSPAAKDHAP GASSSSSSRP PKPKRRLPRP TALPFGPAPP  180
SPRRTRSGES APEWTPAETL ALVAEVAAVD DGWSRSVSAF QKWAMVAENL AASEVFASGP  240
ARRGKRAAGE CKRRWEALAA EYDAVRRWEV RTGGGYWKMS AAARRKAGLP SEFDAEVYGA  300
MDALVRVEEA LLANAVAGGG AGEEVEGLVG SGAGVAVGEE NRGEPEICKE QVKKDELVDE  360
VQKDESGDEE EDEDGRDDEE ATKADPGNAD ASNTIAAAAA AGGTSATGAG TGRRPRRDEL  420
VFIQEGRVRF EIEDLLRASA EVLGSGNFGS SYKATLCEGP AVVVKRFKDM NGVAREDFSE  480
HMRRLGRLTH PNLLPLVAYL YKKEEKLLVT DHISPECTAP HGKPSKKSDV WSLGILILEV  540
LTGKFPATYL GSKGRQNTDL AGWVHAAVSE ERTAEVFDKD ITGAAGAEAD MVTLLQVGLG  600
CCEADVDRRW ELKTAIARID EIPVPPETVV VGDDWSTPSL SNAGEHRSYS MICVRRARRD  660
EGTVYAAARH MHAWVGAVGR IDYWCMNDTT RDRLRRRKNL SPDDTFRARR ENVDQLVLGE  720
DEDHHHARPA GAATEMRFLI LVDIYSAFDR VAQGYCSNAA SIEWCYCYTY VRRRCLQVQY  780
WTCTLWAAYW SGRCAGHEKI VADKGG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	691	696	DRLRRR

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6353	24	33

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31270.1	2e-16	sequence-specific DNA binding transcription factors