PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00040.1.g02870.1.am.mkhc
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 524aa    MW: 57323.6 Da    PI: 7.0436
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00040.1.g02870.1.am.mkhcgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.41.7e-09239279545
                                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                                     k  rr+++NReAAr+sR+RKka+i++Le    +L++  ++L
  Zjn_sc00040.1.g02870.1.am.mkhc 239 KTLRRLAQNREAARKSRLRKKAYIQNLESSRLKLTQLEQEL 279
                                     7889************************9777776666554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.7E-8235298IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.312237281IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.25E-7239282No hitNo description
CDDcd147082.18E-23239291No hitNo description
PfamPF001701.2E-6239279IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.4E-7240283No hitNo description
PROSITE patternPS000360242257IPR004827Basic-leucine zipper domain
PfamPF141442.3E-33321396IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 524 aa     Download sequence    Send to blast
MVADGEYERS GGGGGYGRCR RGDAELRDCS ACHVRSRSTS SLVLGRSILR FLIGSCSIYL  60
SIPSCAVCLT SPSITADLIA DYHFHTDVNV MQLSRVTDFE ALAQSAGFKI EDLANLNTGT  120
LFNLKSSIHT NNIDPLQFGS YKRLISPVHT NTTTAATVAA RIDPSSLAQQ MGAQPNVVPS  180
TTGNMENWGE SAMAAASPMT DTSTDPDTDE GIQMFEQGQI PGPVASDSSE KSRDKLDQKT  240
LRRLAQNREA ARKSRLRKKA YIQNLESSRL KLTQLEQELQ RARQQGIFIS STGDQSQSMS  300
GNGALAFDME YARWLEEHNK HINELRAAVN AHAGDNDLRS IVDNVMAHYD EIFKLKGVAA  360
KADVFHVLSG MWKTPAERCF MWLGGFRSSE LLKLLAGQLE PLTDQQLVGI SNLQQSSQQA  420
EDALSQGMEA LQQSLAETLA SGSLGPAGSS GNVANYMGQM AMAMGKLGTL ENFLRQADNL  480
RLQTLQQMQR ILTTRQSARA LLAISDYFSR LRALSSLWLA RPRE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00492DAPTransfer from AT5G06950Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002458658.10.0transcription factor TGAL1
SwissprotQ415580.0HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLC5XMK20.0C5XMK2_SORBI; Uncharacterized protein
STRINGSb03g037560.10.0(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48638185
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-149bZIP family protein