PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00037.1.g04870.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family Nin-like
Protein Properties Length: 173aa    MW: 18804.4 Da    PI: 10.2773
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00037.1.g04870.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK24.26.8e-083358227
                        RWP-RK  2 ekeisledlskyFslpikdAAkeLgv 27
                                  ek++sle+l++yFs+ +kdAA++Lgv
  Zjn_sc00037.1.g04870.1.am.mk 33 EKTVSLEELQRYFSGRMKDAARSLGV 58
                                  799**********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF542774.12E-7135172No hitNo description
Gene3DG3DSA:3.10.20.2407.8E-6137173No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    Send to blast
MDNGEPKEGE DPEPQVSRRK RRRRKKLAKR ENEKTVSLEE LQRYFSGRMK DAARSLGVPY  60
SQQSMAAPAA SHQAPAPAPA TVHDPPAALL PYLSSAVEVT SSQGSCQEPP PPPPPLPPRM  120
STAIRKKPFH AGDTELVTVK ASYRGDIVRF RVPSSAGVEA VMGEVAKRLG LET
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11725RRKRRRRKK
21822RKRRR
31825RKRRRRKK
41924KRRRRK
51925KRRRRKK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002453272.11e-38protein NLP3
TrEMBLA0A3L6RS295e-38A0A3L6RS29_PANMI; Uncharacterized protein
STRINGSb04g002940.16e-38(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62692939
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24020.13e-07NIN like protein 7