PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00037.1.g03430.1.am.mk

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Trihelix

Protein Properties

Length: 987aa MW: 106222 Da PI: 5.1855

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00037.1.g03430.1.am.mk	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	27.7	7.1e-09	84	162	1	70
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.........rergferspkqCkekwenlnkrykkikegekk 70 +Wt e+laL++ + +++ +r+ ++ ++W+ v++++ +r +r + +C+ +we l+ +y +++++e + Zjn_sc00037.1.g03430.1.am.mk 84 EWTPAETLALVAEVAAVDDGWSRSVSAFQKWAMVAENLaaseafasgLARRGKRAAGECRRRWEALEADYGAVRRWEVR 162 5****************************************9999888889********************9976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50090	6.62	85	150	IPR017877	Myb-like domain
PROSITE profile	PS50011	24.881	692	987	IPR000719	Protein kinase domain
Gene3D	G3DSA:3.30.200.20	2.3E-13	695	754	No hit	No description
SuperFamily	SSF56112	2.16E-44	696	960	IPR011009	Protein kinase-like domain
Pfam	PF07714	4.9E-26	696	890	IPR001245	Serine-threonine/tyrosine-protein kinase catalytic domain
Gene3D	G3DSA:1.10.510.10	1.4E-23	755	890	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006468	Biological Process	protein phosphorylation
GO:0004672	Molecular Function	protein kinase activity
GO:0005524	Molecular Function	ATP binding

Sequence ? help Back to Top
Protein Sequence Length: 987 aa Download sequence Send to blast
MDPPTDDDPP CIIQALRASS STVPAPPLVQ ALPALQSPAK DHAPSSSSSS SRPPKRQPPQ 60 QPAAPPPCPR PPSPRRTRSG GAPEWTPAET LALVAEVAAV DDGWSRSVSA FQKWAMVAEN 120 LAASEAFASG LARRGKRAAG ECRRRWEALE ADYGAVRRWE VRAGLRYWEM SVAARRKAGL 180 PAEFDAEVFG AMDALIRVEE ALLANAGGGG GGAGEEVEGL VGGSAVVEVG EEDTGVPEIG 240 EDEVKENELV DEAQEDESAN EIEDEDGRED DKEMQPDNGN GDTSNSFEEG CEAEAVETNS 300 KTENSQNIVW ELASKLQENA QHIHTILNDE ANECGNENHA LAYSMSPDAM ETTRQKADEL 360 IKSLGGLLGY LNQFTELIEE SGFENKRQQQ TQQLGEALPC LLPPILRPPA SRLAACPPRH 420 PLAFPRRCTC RTRSLTTLPR RRVHCCVRPL PPRQRGGNFD ERPCNDRLVR RDDDSAPPAR 480 VAMVRPRPPD HLRLAIVLVI AAAALLTRAA AQNGERSEAG VLIAFRDTLR GADGAPPGPL 540 RSWGTPGPCQ GTVSSRFNAT MFAGNNFLCG KPLDVECDES GSPRSGVSAL MIAAIVIIIL 600 GVLLCVAGIV TGVLGSRRAS RHAPAETIGS GDQTPSNPKL QTAPAVNIDN AARSRAAGTS 660 EAGAGAGRRP RRDELVFLQE GRVRFEIEDL LRASAEVLGS GNFGSSYKAA LGEEPAVVVK 720 RFKDMNGVGR EDFSEHMRRL GRLRHPNLLP LVAYLYKKDQ KLLITDYMVN GSLAQLLHGN 780 RGSILDWGKR LQIIKGAARG LTHLYDELPM LTVPHGHLKS SNVLLDDAFE AVLSDYALVP 840 VVTSQIAAQV MVAYKSPECT APHGKPSKKS DVWSLGILIL EVLTGKFPAN YLGKGRQNTD 900 LAGWVHSVVA EERNDEVFDK DITGARGAEA DMVKLLQVGL GCCDADVDRR WDLKMAIARI 960 DEIPVPDTVV AVGDSTPSLP NAGDQRS

Sequence ? help Back to Top

Protein Sequence Length: 987 aa Download sequence Send to blast

MDPPTDDDPP CIIQALRASS STVPAPPLVQ ALPALQSPAK DHAPSSSSSS SRPPKRQPPQ  60
QPAAPPPCPR PPSPRRTRSG GAPEWTPAET LALVAEVAAV DDGWSRSVSA FQKWAMVAEN  120
LAASEAFASG LARRGKRAAG ECRRRWEALE ADYGAVRRWE VRAGLRYWEM SVAARRKAGL  180
PAEFDAEVFG AMDALIRVEE ALLANAGGGG GGAGEEVEGL VGGSAVVEVG EEDTGVPEIG  240
EDEVKENELV DEAQEDESAN EIEDEDGRED DKEMQPDNGN GDTSNSFEEG CEAEAVETNS  300
KTENSQNIVW ELASKLQENA QHIHTILNDE ANECGNENHA LAYSMSPDAM ETTRQKADEL  360
IKSLGGLLGY LNQFTELIEE SGFENKRQQQ TQQLGEALPC LLPPILRPPA SRLAACPPRH  420
PLAFPRRCTC RTRSLTTLPR RRVHCCVRPL PPRQRGGNFD ERPCNDRLVR RDDDSAPPAR  480
VAMVRPRPPD HLRLAIVLVI AAAALLTRAA AQNGERSEAG VLIAFRDTLR GADGAPPGPL  540
RSWGTPGPCQ GTVSSRFNAT MFAGNNFLCG KPLDVECDES GSPRSGVSAL MIAAIVIIIL  600
GVLLCVAGIV TGVLGSRRAS RHAPAETIGS GDQTPSNPKL QTAPAVNIDN AARSRAAGTS  660
EAGAGAGRRP RRDELVFLQE GRVRFEIEDL LRASAEVLGS GNFGSSYKAA LGEEPAVVVK  720
RFKDMNGVGR EDFSEHMRRL GRLRHPNLLP LVAYLYKKDQ KLLITDYMVN GSLAQLLHGN  780
RGSILDWGKR LQIIKGAARG LTHLYDELPM LTVPHGHLKS SNVLLDDAFE AVLSDYALVP  840
VVTSQIAAQV MVAYKSPECT APHGKPSKKS DVWSLGILIL EVLTGKFPAN YLGKGRQNTD  900
LAGWVHSVVA EERNDEVFDK DITGARGAEA DMVKLLQVGL GCCDADVDRR WDLKMAIARI  960
DEIPVPDTVV AVGDSTPSLP NAGDQRS

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5uv4_A	1e-36	673	949	5	296	Putative leucine-rich repeat protein kinase family protein
Search in ModeBase

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008680891.1	0.0	pollen receptor-like kinase 5
TrEMBL	K7V6P5	0.0	K7V6P5_MAIZE; Putative leucine-rich repeat protein kinase family protein
STRING	GRMZM2G353659_P01	0.0	(Zea mays)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1228	2	2

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31270.1	1e-15	sequence-specific DNA binding transcription factors