PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00030.1.g00800.1.am.mk

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 1046aa MW: 113359 Da PI: 10.4172

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00030.1.g00800.1.am.mk	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	160.7	5.7e-50	722	847	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 lppGfrFhPtdeelv +yL+++++++ ++ +i+e+d+y+++Pw+Lp+++ +++ewyfF++rd+ky++g+r+nra+ +g Zjn_sc00030.1.g00800.1.am.mk 722 LPPGFRFHPTDEELVLHYLCARAAERGAPV-PIIAELDLYRFDPWELPARALFGRREWYFFTPRDRKYPNGSRPNRAAGTG 801 79***********************999.88***********87778999********************* PP NAM 82 yWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 yWkatg dk+v + +g++vg+kk Lvfy+g+ p+g+kt+W+mheyrl Zjn_sc00030.1.g00800.1.am.mk 802 YWKATGADKPVAH-RGRTVGVKKALVFYHGKPPRGVKTEWIMHEYRL 847 *********.999**************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03222	2.0E-81	87	470	IPR018227	Tryptophan/tyrosine permease
SuperFamily	SSF101941	1.96E-61	718	874	IPR003441	NAC domain
PROSITE profile	PS51005	58.955	722	874	IPR003441	NAC domain
Pfam	PF02365	1.8E-25	723	847	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003333	Biological Process	amino acid transmembrane transport
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 1046 aa Download sequence Send to blast
MSLCSRPHLK LTPSSSPASV FGYPHLRRLR PSRPLTLASA KPQPSPSSSP QAFPSPRRQW 60 RWRRSGSCDA VQQPVLAEAS SGGGGETKSF WAAVSLIVGT AVGPGMLGLP SATILSGQAP 120 SAAAIVFSWA YVVSSIILVA ELCFATMEEG GVEEVSFTGL ASSTLGAGPG AFVAVVYAAL 180 SFSLLVACVA GIGSLVSQLL PGLNRVLANA LFPSFAGVLI AFFPFKAVDG ANRVLCGLML 240 VSITALVVTG VSVGRSSLLN SLGYACWNPG AILPAIPVTM LTLGFHVITP FMCKIVGDSV 300 YDARKAILIG GAVPLAMVLS WNAVILGLAS AGGYAAFDDP IKLLLSVNPA ALPAVRGFAF 360 AALATSLIGY AMSFPKQLSD TVELILRRFS PSKGSDQHSY ATCSDTRSRN GAILKWIVLI 420 IPIFIASFFP AAFSKALDFA GVYANWFLFG ILPPVMAWIH RSQKQKRYFA WRQGYSHRTF 480 QHRCGQEPRR WERWRGNPVA GGATLGEVVG SDGSLEEVTT RRERWRAGVV RCEKGGERGG 540 AALGGRGSAT RRRCRASIAP AGGRDVIPVR FKEPRAREIG LSPSHPKFPI PTTVDAGRSG 600 RFVDPTVAVV NHRRQRCVVS GKRPTSPPNH RAAAVAHQSQ LALTPTRRSF VSLTVSVRLF 660 IPLLSPPHSS PPTSLTDTVS SHRRNAGPNP RHHRKEGNNR IDRQEAMAGP ARRRDAEAEL 720 NLPPGFRFHP TDEELVLHYL CARAAERGAP VPIIAELDLY RFDPWELPAR ALFGRREWYF 780 FTPRDRKYPN GSRPNRAAGT GYWKATGADK PVAHRGRTVG VKKALVFYHG KPPRGVKTEW 840 IMHEYRLADD AGRRKPGSGS LRLDDWVLCR LYNKKNEWEK LQQQQEEEHK ELEMDASHSQ 900 SFGNMRTPES GVHDVDVDQV PAFGDMGAVV PKKEVQEIGD LGGADDWLAG INLDDLQGLC 960 PVPDDDFFSS LLVTPTAARA ELGGLLLLKC RLAGVATWVW WARWVRSHAS GRGVRRRAGV 1020 PGEYAGSPAS GDHGGCGEQD RKSDRR

Sequence ? help Back to Top

Protein Sequence Length: 1046 aa Download sequence Send to blast

MSLCSRPHLK LTPSSSPASV FGYPHLRRLR PSRPLTLASA KPQPSPSSSP QAFPSPRRQW  60
RWRRSGSCDA VQQPVLAEAS SGGGGETKSF WAAVSLIVGT AVGPGMLGLP SATILSGQAP  120
SAAAIVFSWA YVVSSIILVA ELCFATMEEG GVEEVSFTGL ASSTLGAGPG AFVAVVYAAL  180
SFSLLVACVA GIGSLVSQLL PGLNRVLANA LFPSFAGVLI AFFPFKAVDG ANRVLCGLML  240
VSITALVVTG VSVGRSSLLN SLGYACWNPG AILPAIPVTM LTLGFHVITP FMCKIVGDSV  300
YDARKAILIG GAVPLAMVLS WNAVILGLAS AGGYAAFDDP IKLLLSVNPA ALPAVRGFAF  360
AALATSLIGY AMSFPKQLSD TVELILRRFS PSKGSDQHSY ATCSDTRSRN GAILKWIVLI  420
IPIFIASFFP AAFSKALDFA GVYANWFLFG ILPPVMAWIH RSQKQKRYFA WRQGYSHRTF  480
QHRCGQEPRR WERWRGNPVA GGATLGEVVG SDGSLEEVTT RRERWRAGVV RCEKGGERGG  540
AALGGRGSAT RRRCRASIAP AGGRDVIPVR FKEPRAREIG LSPSHPKFPI PTTVDAGRSG  600
RFVDPTVAVV NHRRQRCVVS GKRPTSPPNH RAAAVAHQSQ LALTPTRRSF VSLTVSVRLF  660
IPLLSPPHSS PPTSLTDTVS SHRRNAGPNP RHHRKEGNNR IDRQEAMAGP ARRRDAEAEL  720
NLPPGFRFHP TDEELVLHYL CARAAERGAP VPIIAELDLY RFDPWELPAR ALFGRREWYF  780
FTPRDRKYPN GSRPNRAAGT GYWKATGADK PVAHRGRTVG VKKALVFYHG KPPRGVKTEW  840
IMHEYRLADD AGRRKPGSGS LRLDDWVLCR LYNKKNEWEK LQQQQEEEHK ELEMDASHSQ  900
SFGNMRTPES GVHDVDVDQV PAFGDMGAVV PKKEVQEIGD LGGADDWLAG INLDDLQGLC  960
PVPDDDFFSS LLVTPTAARA ELGGLLLLKC RLAGVATWVW WARWVRSHAS GRGVRRRAGV  1020
PGEYAGSPAS GDHGGCGEQD RKSDRR

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	8e-88	709	880	2	174	Stress-induced transcription factor NAC1

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77450.1	3e-75	NAC domain containing protein 32