PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00028.1.g03850.1.sm.mkhc
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 61aa    MW: 6914.57 Da    PI: 9.4844
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00028.1.g03850.1.sm.mkhcgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY27.75.3e-094060222
                                    --SS-EEEEEEE--TT-SS-E CS
                            WRKY  2 dDgynWrKYGqKevkgsefpr 22
                                    dDg++WrKYG K+  +s+fpr
  Zjn_sc00028.1.g03850.1.sm.mkhc 40 DDGHQWRKYGEKKLSNSNFPR 60
                                    8*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.5E-82860IPR003657WRKY domain
SuperFamilySSF1182901.96E-83260IPR003657WRKY domain
PfamPF031069.1E-74060IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 61 aa     Download sequence    Send to blast
MALDSVPLYP GGDLGSGSRA TSRAHHQRIS WTADTYAPYD DGHQWRKYGE KKLSNSNFPR  60
Y
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3645547e-31AK364554.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2026H13.
GenBankAK3656577e-31AK365657.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv2035P16.
GenBankDQ8631187e-31DQ863118.1 Hordeum vulgare subsp. vulgare WRKY transcription factor 34 (WRKY34) mRNA, partial cds.
GenBankEF3683657e-31EF368365.1 Triticum aestivum WRKY transcription factor (WRKY46) mRNA, complete cds.
GenBankEU6654267e-31EU665426.1 Triticum aestivum WRKY13 transcription factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020172253.11e-23WRKY transcription factor 55-like
TrEMBLA0A287NJ572e-23A0A287NJ57_HORVV; Uncharacterized protein
STRINGEMT289364e-23(Aegilops tauschii)
STRINGTraes_4AL_9E0D1CFA6.14e-23(Triticum aestivum)
STRINGTraes_4DS_FE38A59D0.14e-23(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP203235100