PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00025.1.g00090.1.sm.mkhc

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bHLH

Protein Properties

Length: 135aa MW: 15295.6 Da PI: 10.602

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00025.1.g00090.1.sm.mkhc	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13.1	0.00018	61	87	6	31
HHHHHHHHHHHHHHHHHHHCTSCC.C. CS HLH 6 nerErrRRdriNsafeeLrellPk.as 31 ++Er R+r N +++ Lr+++Pk + Zjn_sc00025.1.g00090.1.sm.mkhc 61 LMAERWQRKRANYRLSMLRSIIPKiSK 87 589*********************663 PP

Sequence ? help Back to Top
Protein Sequence Length: 135 aa Download sequence Send to blast
MRGADVVGAV TGGAPPLQHA RCRRIVGSHL QGMGEFEGLL VGLYSSAHHR SRIHRLQSKN 60 LMAERWQRKR ANYRLSMLRS IIPKISKDRC LQSMTNSCNM YRRIGSFPED LDLLDTLNDS 120 SDNNNAMMIR NSIEP

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025796859.1	1e-18	transcription factor bHLH61-like
TrEMBL	A0A2S3IUG7	3e-17	A0A2S3IUG7_9POAL; Uncharacterized protein
TrEMBL	A0A2T7CHY8	3e-17	A0A2T7CHY8_9POAL; Uncharacterized protein
TrEMBL	A0A3L6SBZ8	3e-17	A0A3L6SBZ8_PANMI; Transcription factor bHLH61-like
STRING	Pavir.Ia04450.1.p	1e-17	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP27886	3	3

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.4	3e-07	bHLH family protein