PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Zjn_sc00024.1.g01730.1.sm.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
||||||||
Family | Nin-like | ||||||||
Protein Properties | Length: 192aa MW: 19713.3 Da PI: 10.703 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 24.9 | 3.9e-08 | 2 | 33 | 10 | 42 |
RWP-RK 10 lskyFslpikdAAkeLgvclTvLKriCRqyGIk 42 +s +F++pik+ +++ v+lTvLK+ CR+++I+ Zjn_sc00024.1.g01730.1.sm.mk 2 VSLHFNMPIKQPSRS-AVGLTVLKKLCRKLNIP 33 6789**********9.7*************996 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 192 aa Download sequence Send to blast |
MVSLHFNMPI KQPSRSAVGL TVLKKLCRKL NIPPCCMESP VPVRVAAAHQ LGRPAACPSV 60 RRHRLAGRWG SAPRGTRKGS SGSKAWATTA ASWGEPAGRR GGEPVGRTAN HGGGTAATAK 120 DTLGYLRPST GSCPSTAACT SFEERDARAA QAPAEAAEAA TGVGSGPATQ EVADQGGVCA 180 GETLWGKGWK GW |