PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zjn_sc00023.1.g00380.1.sm.mkhc | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | Dof | ||||||||
Protein Properties | Length: 369aa MW: 37204 Da PI: 8.6883 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 124.3 | 4.1e-39 | 73 | 133 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 kekal+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknk+ s Zjn_sc00023.1.g00380.1.sm.mkhc 73 KEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRPS 133 7899******************************************************976 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 2.0E-30 | 71 | 131 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 3.1E-33 | 75 | 131 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 29.059 | 77 | 131 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 79 | 115 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 369 aa Download sequence Send to blast |
MDAAHWHQGL GLVKPMEDML MATNAAAANP SQGSAANPPA PAPSSTPGSA LRGGAPAAVA 60 GAGSAERRVR PQKEKALNCP RCNSTNTKFC YYNNYSLQQP RYFCKTCRRY WTEGGSLRNV 120 PVGGGSRKNK RPSSSSASAS TSASITSSSM VSSAGVASKN PKLTQDGAQD LNLAFPHYGG 180 LKAPVDFAAF PSLESSSVGG ATTSNGRGGS SGSAVGAISA MELLRSTGYY MPLQVPMQMP 240 GDYAAAGFSF GEFRAPPPPP PPSQNVFGFS LDAHGSAAGA AAAGYGSGTG LPGAPENASR 300 LLFPFEDLKP PVSSGGGDGA GGASVGPGDE NSGHHQFEHG KEQGGGGPGA GHDTPGFWNS 360 MSGGSGTSW |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that may transactivate seed storage protein genes in developing seeds. {ECO:0000250|UniProtKB:Q6K537}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001356786.1 | 1e-142 | dof zinc finger protein | ||||
Swissprot | Q9SXG8 | 1e-129 | DOF1_ORYSJ; Dof zinc finger protein 1 | ||||
TrEMBL | A0A0A9GUS7 | 1e-153 | A0A0A9GUS7_ARUDO; Uncharacterized protein | ||||
STRING | Pavir.Gb01040.1.p | 1e-136 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2369 | 34 | 86 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24060.1 | 2e-37 | Dof family protein |
Publications ? help Back to Top | |||
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