PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00022.1.g00110.1.am.mkhc

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 454aa MW: 48832.2 Da PI: 9.5579

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00022.1.g00110.1.am.mkhc	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	44.3	3.8e-14	372	425	3	55
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk.eleelkke 55 + +r+rr++kNRe+A rsRqRK+a++ eLe +v++L++ N++L+k ++e+l+k+ Zjn_sc00022.1.g00110.1.am.mkhc 372 AERRQRRMIKNRESAARSRQRKQAYMMELEAEVAKLKEINEELQKkQVEMLEKQ 425 568***************************************964157777776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	7.1E-15	366	432	No hit	No description
SMART	SM00338	8.3E-13	370	435	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.99	372	417	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.9E-12	372	427	IPR004827	Basic-leucine zipper domain
CDD	cd14707	5.65E-26	374	426	No hit	No description
SuperFamily	SSF57959	3.05E-10	374	424	No hit	No description
PROSITE pattern	PS00036	0	377	392	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 454 aa Download sequence Send to blast
CGVREAKWLV ECAPPPPSSM RFRRGLGPAA GVLNGPSHGS SQATPVLPPF VPLRLECPYS 60 PPRDQRASST SPPQVPLDFP LANSGIPCRQ VSLTLPPSPL LCACAPDSLL LLLSVWIGRR 120 QQQPQLEEHL PPMTPLPLAR QGSVYSLTFD EFQSALGGPT KDFGSMNMDE LLRSIWTAEE 180 LQAVGAANAA AAADQAAARA AAIQRQGSLT LPRTLSQKTV DEVWRNIMCV GGPSDAPAPV 240 PATQRQQTLG EVTLEEFLMR AGVVREDMTA GPSAPTVQAP LPPPGQPTSQ PQMLFPQGNV 300 FAPLVPPLPL GNGLVTGGGG AVSAISPARP VTSNGFGKME GDDLSSLSPS PVPYVFGGGL 360 RGRKPSAIEK AAERRQRRMI KNRESAARSR QRKQAYMMEL EAEVAKLKEI NEELQKKQVE 420 MLEKQKNEVL ERMTRQVGPT AKRICLRRTL TGPW

Sequence ? help Back to Top

Protein Sequence Length: 454 aa Download sequence Send to blast

CGVREAKWLV ECAPPPPSSM RFRRGLGPAA GVLNGPSHGS SQATPVLPPF VPLRLECPYS  60
PPRDQRASST SPPQVPLDFP LANSGIPCRQ VSLTLPPSPL LCACAPDSLL LLLSVWIGRR  120
QQQPQLEEHL PPMTPLPLAR QGSVYSLTFD EFQSALGGPT KDFGSMNMDE LLRSIWTAEE  180
LQAVGAANAA AAADQAAARA AAIQRQGSLT LPRTLSQKTV DEVWRNIMCV GGPSDAPAPV  240
PATQRQQTLG EVTLEEFLMR AGVVREDMTA GPSAPTVQAP LPPPGQPTSQ PQMLFPQGNV  300
FAPLVPPLPL GNGLVTGGGG AVSAISPARP VTSNGFGKME GDDLSSLSPS PVPYVFGGGL  360
RGRKPSAIEK AAERRQRRMI KNRESAARSR QRKQAYMMEL EAEVAKLKEI NEELQKKQVE  420
MLEKQKNEVL ERMTRQVGPT AKRICLRRTL TGPW

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator that mediates abscisic acid (ABA) signaling (PubMed:18931143, PubMed:19947981, PubMed:27424498, PubMed:27325665). Can regulate the expression of a wide spectrum of stress-related genes in response to abiotic stresses through an ABA-dependent regulation pathway. Confers ABA-dependent drought and salinity tolerance (PubMed:18931143, PubMed:27325665). Binds specifically to the ABA-responsive elements (ABRE) in the promoter of target genes to mediate stress-responsive ABA signaling (PubMed:27325665, PubMed:27424498). {ECO:0000269\|PubMed:18931143, ECO:0000269\|PubMed:19947981, ECO:0000269\|PubMed:27325665, ECO:0000269\|PubMed:27424498}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by abscisic acid (ABA) (PubMed:18315698, PubMed:18931143). Induced by drought, salt and osmotic stresses (PubMed:18931143). {ECO:0000269\|PubMed:18315698, ECO:0000269\|PubMed:18931143}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025799480.1	1e-161	bZIP transcription factor 23
Swissprot	Q6Z312	1e-148	BZP23_ORYSJ; bZIP transcription factor 23
TrEMBL	A0A2S3GTZ2	1e-160	A0A2S3GTZ2_9POAL; Uncharacterized protein
STRING	Sb04g034190.1	1e-159	(Sorghum bicolor)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP706	38	147

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49720.2	8e-43	abscisic acid responsive element-binding factor 1

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Xiang Y,Tang N,Du H,Ye H,Xiong L Characterization of OsbZIP23 as a key player of the basic leucine zipper transcription factor family for conferring abscisic acid sensitivity and salinity and drought tolerance in rice. Plant Physiol., 2008. 148(4): p. 1938-52 [PMID:18931143] Shen J,Xie K,Xiong L Global expression profiling of rice microRNAs by one-tube stem-loop reverse transcription quantitative PCR revealed important roles of microRNAs in abiotic stress responses. Mol. Genet. Genomics, 2010. 284(6): p. 477-88 [PMID:20941508] Luo C,Guo C,Wang W,Wang L,Chen L Overexpression of a new stress-repressive gene OsDSR2 encoding a protein with a DUF966 domain increases salt and simulated drought stress sensitivities and reduces ABA sensitivity in rice. Plant Cell Rep., 2014. 33(2): p. 323-36 [PMID:24247850] Sakuraba Y, et al. Rice ONAC106 Inhibits Leaf Senescence and Increases Salt Tolerance and Tiller Angle. Plant Cell Physiol., 2015. 56(12): p. 2325-39 [PMID:26443376] Hong Y,Zhang H,Huang L,Li D,Song F Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice. Front Plant Sci, 2016. 7: p. 4 [PMID:26834774] Dey A,Samanta MK,Gayen S,Sen SK,Maiti MK Enhanced Gene Expression Rather than Natural Polymorphism in Coding Sequence of the OsbZIP23 Determines Drought Tolerance and Yield Improvement in Rice Genotypes. PLoS ONE, 2016. 11(3): p. e0150763 [PMID:26959651] Zong W, et al. Feedback Regulation of ABA Signaling and Biosynthesis by a bZIP Transcription Factor Targets Drought-Resistance-Related Genes. Plant Physiol., 2016. 171(4): p. 2810-25 [PMID:27325665] Dey A,Samanta MK,Gayen S,Maiti MK The sucrose non-fermenting 1-related kinase 2 gene SAPK9 improves drought tolerance and grain yield in rice by modulating cellular osmotic potential, stomatal closure and stress-responsive gene expression. BMC Plant Biol., 2016. 16(1): p. 158 [PMID:27411911] Gui J, et al. OsREM4.1 Interacts with OsSERK1 to Coordinate the Interlinking between Abscisic Acid and Brassinosteroid Signaling in Rice. Dev. Cell, 2016. 38(2): p. 201-13 [PMID:27424498]