 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Zjn_sc00020.1.g06550.1.sm.mkhc |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
E2F/DP |
| Protein Properties |
Length: 241aa MW: 25532.2 Da PI: 6.9559 |
| Description |
E2F/DP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zjn_sc00020.1.g06550.1.sm.mkhc | genome | ZGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | E2F_TDP | 25.2 | 2.8e-08 | 89 | 128 | 2 | 38 |
E2F_TDP 2 keksLrlltqkflklleksee.givtlnevakeLvse.....d 38
++++Lr+++++ ++ek+e+ g++t+neva+eLv e +
Zjn_sc00020.1.g06550.1.sm.mkhc 89 NGRGLRQFSMR---VCEKVESkGRTTYNEVADELVVEfsdpnN 128
789********...*****999************998665552 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005667 | Cellular Component | transcription factor complex |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 241 aa
Download sequence Send
to blast |
MASGALQSGG AAHSASNSGG SPSGHAASDR GAASASISTP ASGSTVARRL DALDLQGDDA 60
PSSQPAARFV SPKRKKKKRC ARAVGPEKNG RGLRQFSMRV CEKVESKGRT TYNEVADELV 120
VEFSDPNNVD SPDPDNPNAT RPHATVEVEI SEDMQLVHFD FNSTPFELQD DSFVLKAMGL 180
SGKEETDMVQ VPDANGGSVE CSSTPNNHWH QSQTPARPKG LRLPPSAPIP GILKGRVKHE 240
H
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 72 | 78 | KRKKKKR |
| 2 | 73 | 78 | RKKKKR |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. The complex DPB/E2FC restricts cell division and lateral root initiation and may function as a negative regulator of E2F-regulated genes. The interaction with SKP2A is controlled by auxin. {ECO:0000269|PubMed:11891240, ECO:0000269|PubMed:16920782}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | BT009415 | 1e-54 | BT009415.1 Triticum aestivum clone wlmk1.pk0005.e2:fis, full insert mRNA sequence. |
