PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zjn_sc00018.1.g02650.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | Dof | ||||||||
Protein Properties | Length: 357aa MW: 37998.4 Da PI: 9.3108 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 120 | 8.8e-38 | 39 | 95 | 5 | 61 |
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +cprC+s++tkfCyynny++sqPr+fCk+CrryWtkGG+lrnvPvGgg+rk+ ++ Zjn_sc00018.1.g02650.1.am.mk 39 GEPCPRCESRETKFCYYNNYNTSQPRHFCKSCRRYWTKGGSLRNVPVGGGTRKSSSA 95 578**************************************************9765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 3.0E-23 | 39 | 89 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 28.677 | 40 | 94 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 6.4E-32 | 40 | 93 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 42 | 78 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 357 aa Download sequence Send to blast |
MQEPTRRPAP PFAGVDLRRP KGYPEPATVK VEEAPATAGE PCPRCESRET KFCYYNNYNT 60 SQPRHFCKSC RRYWTKGGSL RNVPVGGGTR KSSSASPASP KNPKRSKNSK RRRVAPSPDP 120 APSTDDAVAS NAGVGDREPT PAPLTEDAAA GNVEDRAHVA PPAAEQGFKS TSVARGLGVT 180 DAGGGGGKEP PDTGPFEWPS SCGDLGSFWG AGVFTDTDPA LPVEFDPSGL SRRGHAPPMT 240 QPGALLRDRV RQLIGNFRLP RTYDGRAGVA WGSTARWSVP PSPGAFGWTS TSWCFELRAA 300 ADADGSLIPT ATRALYAASG SVVGWISIVT SSREWRGEGV HTRCWLPTGV FLPQLCH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 109 | 113 | KRRRV |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004957110.1 | 3e-76 | dof zinc finger protein MNB1A | ||||
TrEMBL | A0A1E5V289 | 4e-81 | A0A1E5V289_9POAL; Dof zinc finger protein MNB1A | ||||
STRING | Si030774m | 1e-75 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP140 | 37 | 367 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51700.1 | 3e-27 | DOF zinc finger protein 1 |