PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00018.1.g00080.1.sm.mkhc

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

BES1

Protein Properties

Length: 376aa MW: 39942.2 Da PI: 8.0084

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00018.1.g00080.1.sm.mkhc	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	189.6	1.2e-58	46	184	12	148
DUF822 12 rEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl..eeaeaagssasa 88 rEnn+rRERrRRaiaaki+aGLRa+Gny+lpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+ e+++ +g+sas Zjn_sc00018.1.g00080.1.sm.mkhc 46 RENNRRRERRRRAIAAKIFAGLRAYGNYNLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPPaaERHDPIGQSASP 124 9**************************************************************9999****** PP DUF822 89 spesslqsslkssalaspvesysaspksssfpspssldsislasa........asllpvlsvlslvss 148 sp+ss+q +sp +sy++sp+sssfps+ s+++++l + +sl+p+l++ls+++s Zjn_sc00018.1.g00080.1.sm.mkhc 125 SPCSSYQ--------PSPQASYNPSPASSSFPSSGSSSHLTLGGNnfiggvegSSLIPWLKNLSSSPS 184 ***........88999999999999999999888888887788888888*******998655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	5.8E-64	46	180	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence Send to blast
MPWLPLVPAP GFAERVAHFS TRAPAARGVI AITYRSQAPC SVTLARENNR RRERRRRAIA 60 AKIFAGLRAY GNYNLPKHCD NNEVLKALCN EAGWTVEPDG TTYRKGCKPP AAERHDPIGQ 120 SASPSPCSSY QPSPQASYNP SPASSSFPSS GSSSHLTLGG NNFIGGVEGS SLIPWLKNLS 180 SSPSFASSSK FTQIQHLYFN GGSISAPVTP PSSSPTRTPR FKTDWENPSV QPPWAGENYA 240 SLPNSTPPSP GRQVAPDPAW LAGFQISSAG PSSPTYNLVA PNPFGIFRET VASSSRMCTP 300 GQSGTCSPVM GDVPAHHDVQ MGDGAPDDFA FGSSSNGNNE SPGLVKAWEG ERIHEECVSD 360 ELELTLGSSK TRADPS

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence Send to blast

MPWLPLVPAP GFAERVAHFS TRAPAARGVI AITYRSQAPC SVTLARENNR RRERRRRAIA  60
AKIFAGLRAY GNYNLPKHCD NNEVLKALCN EAGWTVEPDG TTYRKGCKPP AAERHDPIGQ  120
SASPSPCSSY QPSPQASYNP SPASSSFPSS GSSSHLTLGG NNFIGGVEGS SLIPWLKNLS  180
SSPSFASSSK FTQIQHLYFN GGSISAPVTP PSSSPTRTPR FKTDWENPSV QPPWAGENYA  240
SLPNSTPPSP GRQVAPDPAW LAGFQISSAG PSSPTYNLVA PNPFGIFRET VASSSRMCTP  300
GQSGTCSPVM GDVPAHHDVQ MGDGAPDDFA FGSSSNGNNE SPGLVKAWEG ERIHEECVSD  360
ELELTLGSSK TRADPS

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	5e-23	58	109	391	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	5e-23	58	109	391	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	5e-23	58	109	391	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	5e-23	58	109	391	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
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Functional Description ? help Back to Top
Source	Description
UniProt	May function in brassinosteroid signaling. {ECO:0000250}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00248	DAP	Transfer from AT1G78700	Download

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025813584.1	0.0	protein BZR1 homolog 3
Swissprot	Q5Z9E5	0.0	BZR3_ORYSJ; Protein BZR1 homolog 3
TrEMBL	A0A1E5VA88	0.0	A0A1E5VA88_9POAL; Protein BZR1-like protein 3
STRING	Pavir.J12085.1.p	0.0	(Panicum virgatum)
STRING	OMERI06G17170.1	0.0	(Oryza meridionalis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1366	38	112

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	3e-63	BES1/BZR1 homolog 4

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764]