PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00015.1.g07180.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 651aa    MW: 69370.3 Da    PI: 9.685
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00015.1.g07180.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP240.85.5e-134899155
                           AP2  1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
                                  + y+G r++ + grW+  +r+p   g +  r ++g+f+tae Aa+a++aa+++l g
  Zjn_sc00015.1.g07180.1.am.mk 48 PVYRGARRRGRAGRWR-WVRVP---GsRGDRLWVGTFDTAEAAARAHDAAMLALCG 99
                                  68**************.66676...6555**********************99865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008479.3E-94899IPR001471AP2/ERF domain
PROSITE profilePS5103215.5449108IPR001471AP2/ERF domain
SuperFamilySSF541715.62E-1149109IPR016177DNA-binding domain
SMARTSM003802.7E-749114IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.6E-1749110IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 651 aa     Download sequence    Send to blast
MCVIKTEAAS ETASSSPSST SSLSSPASQH VPAKRPAGPP KFRETRHPVY RGARRRGRAG  60
RWRWVRVPGS RGDRLWVGTF DTAEAAARAH DAAMLALCGG SFNGLNFADS AWLLHVQTGG  120
ALPDVQRAAT EAVAEFMRRH GGGAAASSAP VPQPAASAST AMSQHETAME FDLYGGMDAA  180
SYYASLAEGL LMEPPPTAVE CPEDEECAAD GMELGASALF PPEVHLFIFP RRPGVGTLQV  240
GETSAVETRS PLDADPSASG PPSVPGAAPG DGWRRGLASV NARQTSQKAG FCPAILCTAW  300
PRRRSVVARV VARPAERELS NAEPPREKVV CAVGVGVASQ LRGQLGAGDE CATAPGAKNR  360
CLWTEPQLPV AQFRLTFSPS PSPPPPSPFP LAAHGTVGEG RLVSSTTNFC RPKKRKHARG  420
ETFVTATGRT SPRRRRRRTG SREPPRKRVV RMSEISLLLV VGMNQSTDLR GASHGGGPGI  480
PASPSLNRSH GCGPRPTERD GTFWWCLCYT PNRAAVFLLP PCPRQGLARP DGGHCCHDLW  540
FHALASARPY SSICLSRQPN VTRTWMLETF ACDYQVAVTL LGARSPASCA HFDRHHEQAT  600
RGDQTTVRGR PIETAPPAPT GHTASLSGPY APWQPRDGTT SCAAPRRVSY P
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1413435KRKHARGETFVTATGRTSPRRRR
2428437RTSPRRRRRR
3433438RRRRRT
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19636261
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.12e-12C-repeat/DRE binding factor 2