PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zjn_sc00015.1.g04390.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | MYB_related | ||||||||
Protein Properties | Length: 168aa MW: 18009.6 Da PI: 10.3242 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 33.4 | 1e-10 | 130 | 162 | 1 | 32 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmg 32 +g+WT+eEde+l++++++ Gg+ +W+t +r g Zjn_sc00015.1.g04390.1.am.mk 130 KGPWTPEEDEKLLQYIQKNGGHgSWRTLPRLAG 162 79*******************9********999 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 1.94E-7 | 116 | 158 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 12.669 | 125 | 168 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 7.8E-11 | 128 | 162 | IPR009057 | Homeodomain-like |
Pfam | PF00249 | 4.4E-8 | 130 | 162 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 8.50E-5 | 132 | 163 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence Send to blast |
MPGSFLLLRS GRYSFPRRTR TSGEESRSGS FALTQTTASF FAAGSVQAAT TRTMLHSSSP 60 CVRAQAKPPL PGPVHKLQAT DHSPSPWPPL TCMSSKNLLL CVALAVVLFG VVGRGAMGRP 120 PCCDESGLKK GPWTPEEDEK LLQYIQKNGG HGSWRTLPRL AGTDGDRS |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP43687 | 2 | 3 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34670.1 | 3e-20 | myb domain protein 93 |