PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zjn_sc00014.1.g08710.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | Dof | ||||||||
Protein Properties | Length: 327aa MW: 34239.2 Da PI: 10.1517 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 122.3 | 1.7e-38 | 69 | 129 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e lkcprC+stntkfCy+nnysl+qPr+fCk+CrryWt+GG+lrnvPvGgg+r+nk+++ Zjn_sc00014.1.g08710.1.am.mk 69 PEPGLKCPRCESTNTKFCYFNNYSLKQPRHFCKTCRRYWTRGGTLRNVPVGGGCRRNKRTK 129 56789*****************************************************987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 7.0E-37 | 53 | 127 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 3.0E-32 | 73 | 127 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 29.273 | 73 | 127 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 75 | 111 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 327 aa Download sequence Send to blast |
MASSKVAEAV AEEAVAWSHI VTSNTSYLRP DMAMVGAANG GGGGPTSGGS AVRPGSMTER 60 ARLERIPQPE PGLKCPRCES TNTKFCYFNN YSLKQPRHFC KTCRRYWTRG GTLRNVPVGG 120 GCRRNKRTKS SKSNSSSAAS ASATGGTSSS TSSTATGGSS AAATAGIMPP QTQLPFLASS 180 LHQFGGDHYS TGASRLGFSG LSSLDPVDYQ FGTGGGAGTA IGLDHWSMPQ IQQFPFFSRP 240 DGVPPPMPGI YPFDAEGGGD AASFAGQMLP GSKVPGSSGL ITQLASVKME DNNPQQRAIY 300 SSACNPRNEL ARAGRRRREW LASQRSP |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025792577.1 | 1e-116 | dof zinc finger protein DOF2.4-like | ||||
TrEMBL | A0A1E5WK86 | 1e-123 | A0A1E5WK86_9POAL; Dof zinc finger protein DOF5.1 | ||||
STRING | Pavir.Ia00290.1.p | 1e-116 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4893 | 29 | 61 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G55370.2 | 6e-44 | OBF-binding protein 3 |