PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zjn_sc00014.1.g05440.1.sm.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | Dof | ||||||||
Protein Properties | Length: 349aa MW: 35880.8 Da PI: 9.2816 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 120.2 | 7.6e-38 | 55 | 111 | 3 | 59 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknk 59 ++ l+cprC+s+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rk + Zjn_sc00014.1.g05440.1.sm.mk 55 QTPLRCPRCNSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKPR 111 66789**************************************************87 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF02701 | 2.1E-31 | 57 | 110 | IPR003851 | Zinc finger, Dof-type |
ProDom | PD007478 | 2.0E-25 | 58 | 109 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 29.096 | 58 | 112 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 60 | 96 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 349 aa Download sequence Send to blast |
MDQLKSVNDG NPTPLPMLLH PVVSNPSPTS SSSTSSRSST SSPKGQGQGQ GAAEQTPLRC 60 PRCNSSNTKF CYYNNYNLTQ PRHFCKTCRR YWTKGGALRN VPIGGGCRKP RPIPMPAAKP 120 AISCKAGGVG PQLGLGVGMG MGGASPVPWA SSQQAAAAQL MALLNSARNV QGHGGSNVHR 180 LLGLDTMGHL PLHVLPGGPG AGNVAGVPAS LWPLSAPRQV PATPAHMDSQ LGMSPLGHHD 240 MLSNLGIKLP PSSASPAPSY YSDQLHAVMS NAGHPHEYDV ASTTSLPCTT AVTSLPPAIS 300 SVSAALSSAT AGLDLPPVSL SAPEMQYWTG PAAMSVAWPD LTTPNGAFP |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004981654.1 | 1e-145 | dof zinc finger protein 4 | ||||
TrEMBL | A0A368SE80 | 1e-144 | A0A368SE80_SETIT; Uncharacterized protein | ||||
TrEMBL | K4ALA5 | 1e-144 | K4ALA5_SETIT; Uncharacterized protein | ||||
STRING | Si039685m | 1e-145 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP7710 | 31 | 44 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07640.1 | 8e-32 | Dof family protein |