PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zjn_sc00014.1.g00950.1.sm.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | C2H2 | ||||||||
Protein Properties | Length: 249aa MW: 26539.9 Da PI: 6.7904 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.9 | 0.00034 | 180 | 202 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cg++F ++ L H r H Zjn_sc00014.1.g00950.1.sm.mk 180 FQCNLCGRCFDSHQALGGHVRGH 202 89**************9999987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57667 | 1.55E-5 | 178 | 205 | No hit | No description |
PROSITE profile | PS50157 | 10.637 | 180 | 207 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 182 | 202 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence Send to blast |
MAVGEDYHSC SDDSDDDVDR YEFLARQPTD DPARRHAEEE ASDDDETGDE RVQDGGSRGK 60 MALTERDGRV EGSDASPSPK KARLGLITAC PSAAHQTPTS ISSGTDRMVS ASPHGARRDR 120 VSSWSEDETE NRRDGAHERP EPRRGKANKS DTKKPLAGVT KSAKTTSPSS SAAASADGRF 180 QCNLCGRCFD SHQALGGHVR GHLQKAKIAA IAAEASLHDT SSRVTSAAIA RKRLSTMQRV 240 AGIPAEVGT |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP24421 | 2 | 2 |