PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00013.1.g05550.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 303aa    MW: 32818.3 Da    PI: 11.1886
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00013.1.g05550.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.12.5e-10203255254
                                   XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                                   +e++r rrk++NR++A+rsR+RK++++eeL+  ++ L ae +    +l +l  
  Zjn_sc00013.1.g05550.1.am.mk 203 EERRRKRRKISNRLSAQRSRARKQQRLEELRATAARLRAEKEGFEARLRTLAR 255
                                   7899**************************************99999988865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.8E-9200257No hitNo description
SMARTSM003383.4E-8201266IPR004827Basic-leucine zipper domain
PfamPF001706.3E-7203257IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.657204267IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.62E-6206261No hitNo description
PROSITE patternPS000360209224IPR004827Basic-leucine zipper domain
CDDcd147028.77E-12212256No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MAGPSRQQAS PTYAPGLPTA PERARRRGAP ARSGCPARGH VCRRCAPGHP AGSYASKSAV  60
RWERHPTPAA GESPPPRVQR QPAPDADGGA AILPSRLRIS GSTTHELGFD APVVSTQSQS  120
KTTDEMLSLQ EVLGHDTLVA PSCCGGARDH DIITSGFTPW GPESCPTLDQ VLMMAASSAT  180
PSLPGQELDG SMDAVITADD DDEERRRKRR KISNRLSAQR SRARKQQRLE ELRATAARLR  240
AEKEGFEARL RTLARHDVAL RCQNARLRAE AAALSRRLLA LQRLARLQVV APRPMMRLAS  300
LMT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1204210RRRKRRK
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9576763e-46EU957676.1 Zea mays clone 1603335 ocs element-binding factor 1 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008665488.12e-45ocs element-binding factor 1-like
TrEMBLA0A1D6L6615e-44A0A1D6L661_MAIZE; Ocs element-binding factor 1
STRINGGRMZM2G177046_P018e-45(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP138452429