PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Zjn_sc00013.1.g05350.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
||||||||
Family | Dof | ||||||||
Protein Properties | Length: 1080aa MW: 114944 Da PI: 10.8643 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 119.3 | 1.5e-37 | 789 | 846 | 3 | 60 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 ++ l+cprC+s+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rk + Zjn_sc00013.1.g05350.1.am.mk 789 QAPLPCPRCNSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKPRP 846 66789**************************************************875 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51257 | 5 | 1 | 28 | No hit | No description |
Pfam | PF02701 | 2.8E-31 | 791 | 845 | IPR003851 | Zinc finger, Dof-type |
ProDom | PD007478 | 1.0E-25 | 792 | 843 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 29.357 | 792 | 846 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 794 | 830 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 1080 aa Download sequence Send to blast |
MPGALRASNT ILIAVSFYPT TIHGLGSCDL ASITLWAQVF APPARAVRGL MLYLTLVTPT 60 PTPTDRLRAL RAGRWCSFLL DAMMMAVPES LSSGAAPAPI RAGLEALGLS APHCRAEEPA 120 RSLPGARTFR EIKRCVPGRS DKAAGNGEEA HKEWNGNTER FCHVVTGSTA SFQAWFRELQ 180 QQSHPWQHGT NPEVDRHHHA LILLARAPPP LPTPPCCTLI SLPSAERRSP SRSGRREKTL 240 YEPHPIDILR ASLLDERDRI EPRAGTSTPR PSAVPVLALR ESQAKKKQQQ RGHRREGGRE 300 GDGAGAFCLH PSSVRPFVRA SFPNSESASF ARPIADRCAR HSSGFQRAQT LIRSTTRAFR 360 RHGSSMQEDE GADRRENPPS RLVDRSTDRH DRSPCPGEAQ QRGRQARTRS IVARVPRSQS 420 GSRRGHPVAL AFPPVRPSLY RFAFAGRPAR AAFVEPSRGR PRTGGGALRS SAVSRGDERA 480 AWVGLGWRLG ADEAQESGGR GAPAPPPPHR ACLRGAPVAG MPHACFPRPA SQPWESVIDD 540 KHGADRPRPG KATRPDAVRP SFAGERIPNF LSAVYDMHAW PAEKAHPSTV HTTRAGAGLK 600 YAFFATSRQG PGCLVKASSP PSRVSHAALD CMIGLASGGA PAAELDCHDH TLPVPGRPNP 660 AARFAGHAGR DVTSPRRRTT FAISKKEPII LCCFTKPFKQ LSLRFPVSPS VTMIQELLGG 720 AAMDQLKSVN DGNPASLPML LHPIVAAPSP TSSSSTSSRS SAQQPLPQRS TSATSSPQGQ 780 QQGQGAAEQA PLPCPRCNSS NTKFCYYNNY NLTQPRHFCK TCRRYWTKGG ALRNVPIGGG 840 CRKPRPMPTP AAKPVMSCKG LGVGPQLGLG VGMGMGGASP VPWAPSQQTA AAQLMALLSS 900 ARGMQGHGGS NVHRLLGLDS IGHLPLHVLP GTGNATGAPA SLWPPSAPRQ VPATPANMDS 960 QLGMGPLGHN DVLSNLGLKL PPSSQSPAPN YYNDQLHAVV SNAGRAREYD ASATSLPCTT 1020 TVTSLSPAVS SISAALSGAT AGQLDLLPVS LAAPEMQYWT GPAAMPVAWP DLPTPNGAFP |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP7710 | 31 | 44 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G07640.1 | 4e-30 | Dof family protein |