PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zjn_sc00012.1.g00920.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | HB-other | ||||||||
Protein Properties | Length: 738aa MW: 81478.6 Da PI: 10.3181 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 49 | 1e-15 | 549 | 603 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +R +++++q + Lee F++n++p++ +++ LA+ +++t +qV +WF NrRa+ kk Zjn_sc00012.1.g00920.1.am.mk 549 RRKRLSHYQSRMLEESFQQNNNPDKVTKQALADTVNVTLKQVHTWFLNRRARLKK 603 6899************************************************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF56112 | 1.12E-18 | 235 | 325 | IPR011009 | Protein kinase-like domain |
Gene3D | G3DSA:3.30.200.20 | 4.0E-24 | 237 | 320 | No hit | No description |
SMART | SM00220 | 3.5E-5 | 240 | 377 | IPR000719 | Protein kinase domain |
PROSITE profile | PS50011 | 10.492 | 240 | 594 | IPR000719 | Protein kinase domain |
Pfam | PF00069 | 2.1E-12 | 240 | 327 | IPR000719 | Protein kinase domain |
PROSITE pattern | PS00107 | 0 | 246 | 270 | IPR017441 | Protein kinase, ATP binding site |
Gene3D | G3DSA:1.10.510.10 | 5.5E-5 | 326 | 373 | No hit | No description |
PROSITE profile | PS50071 | 15.273 | 544 | 604 | IPR001356 | Homeobox domain |
SMART | SM00389 | 1.3E-13 | 547 | 608 | IPR001356 | Homeobox domain |
SuperFamily | SSF46689 | 4.11E-17 | 547 | 604 | IPR009057 | Homeodomain-like |
Pfam | PF00046 | 3.2E-13 | 549 | 603 | IPR001356 | Homeobox domain |
Gene3D | G3DSA:1.10.10.60 | 7.1E-16 | 549 | 617 | IPR009057 | Homeodomain-like |
CDD | cd00086 | 3.24E-14 | 549 | 605 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006468 | Biological Process | protein phosphorylation | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0004672 | Molecular Function | protein kinase activity | ||||
GO:0005524 | Molecular Function | ATP binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 738 aa Download sequence Send to blast |
MKRAQTAVRV FQTNFLHALV LHGDVHRTTI PRGRAPPEEE KGSEERNQPP ATSPHASPNP 60 RAPASASLLS PPQAKRRAPR RSRAPNARGA RFMGGRARSL LRWLRHRSRR VSSSSSSSSF 120 PLTTNDTTTT SGDLHAQSLP HLDRGEEADE SEEEVAEPAS EGYIVVEACG AAGTRAPVPA 180 RTQPPRMDSS KKVRAFFPLR RLCFCSSAVT FGSMTITMCG RRVPMAESDF FTEYGEANRY 240 QVSEVIGKGS YGVVAAAIDT QTGERVAIKK IIDVFDHVSD ATRILREVKL LRLLRHPDIV 300 QIKHIMLPPS RREFKDIYIR NEKARRYLSN MRKKAPVPFT KKFPGVEPMA LHLLKRLLSF 360 DPKERPSADE NHAHANHAAR SPRRHHLAPL PPARAACSHE NFCDKAAHAS VTDGISQQQL 420 SARSLLKSES ISASKCIAYV NGRPGAQKGY FGVLVVPSPS QHFSGPFCLP PMESTGAPVS 480 PSALELTIAT PAYGHKGSNI ENNRELALLD AFDHPLSGGE EDAEAHAGME KEGNEDTQPV 540 GVGPAFQPRR KRLSHYQSRM LEESFQQNNN PDKVTKQALA DTVNVTLKQV HTWFLNRRAR 600 LKKDKMEQDE KELNGYKSQV ESLTEETHYL RCKLKKLKKK YNKLKLKQAP PPMALPLPPP 660 PPPQAIAAAA VEQQQHQNQV MYVPVLTGLF ANREQSVATT TVTTAPFNAQ QGRATAIPGL 720 PIAANTLQLP PPSDYSNN |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5ci6_A | 7e-17 | 246 | 322 | 44 | 120 | Mitogen-activated protein kinase 6 |
5ci6_B | 7e-17 | 246 | 322 | 44 | 120 | Mitogen-activated protein kinase 6 |
6dtl_A | 6e-17 | 246 | 322 | 38 | 114 | Mitogen-activated protein kinase 6 |
6dtl_B | 6e-17 | 246 | 322 | 38 | 114 | Mitogen-activated protein kinase 6 |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 596 | 603 | RRARLKKD |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KR422427 | 5e-87 | KR422427.1 Triticum aestivum cultivar Norstar mitogen activated protein kinase 21-1 (MPK21-1) mRNA, complete cds. |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP62554 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01430.1 | 1e-13 | homeobox-leucine zipper protein 17 |