PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00011.1.g05940.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family BES1
Protein Properties Length: 165aa    MW: 18543.9 Da    PI: 11.6807
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00011.1.g05940.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822128.86.4e-40381472113
                        DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaa 82 
                                   +s r+pt +ErEnn++RERrRR++aa+iyaGLRa+++y lpk+aD+n+Vl+ALc+eAG+ v++DG + r   +++e     
  Zjn_sc00011.1.g05940.1.am.mk  38 TSLRHPTPRERENNRLRERRRRQVAARIYAGLRAHAGYVLPKHADQNDVLRALCAEAGYHVDEDGVVTR--LQRPEGGRGP 116
                                   789****************************************************************99..5555567777 PP

                        DUF822  83 gssasaspesslqsslkssalaspvesysas 113
                                    +s+++++ s  + ++++ +l+    +++++
  Zjn_sc00011.1.g05940.1.am.mk 117 SCSSDQQKPSTASGTTEAVTLQQLELEQKQQ 147
                                   7777666666656444444444333333333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056874.0E-3140126IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    Send to blast
MRWQWRLLGQ GGRRARRRGG GGASARRRGR GRCAGVTTSL RHPTPREREN NRLRERRRRQ  60
VAARIYAGLR AHAGYVLPKH ADQNDVLRAL CAEAGYHVDE DGVVTRLQRP EGGRGPSCSS  120
DQQKPSTASG TTEAVTLQQL ELEQKQQREE KAKLSLDLTL SFAYM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A5e-1261106392437Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B5e-1261106392437Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C5e-1261106392437Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D5e-1261106392437Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9477564e-78EU947756.1 Zea mays clone 356679 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004971713.13e-48protein BZR1 homolog 3-like
TrEMBLA0A3L6SLY72e-49A0A3L6SLY7_PANMI; Uncharacterized protein
STRINGPavir.Eb00361.1.p7e-50(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP132013032
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19350.33e-15BES1 family protein