PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Zjn_sc00009.1.g08870.1.sm.mkhc | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 309aa MW: 34380.9 Da PI: 8.4252 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 45.9 | 1.2e-14 | 234 | 276 | 5 | 47 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 +r++r++kNRe+A rsR+RK+a++ eLe+kv L++eN++Lk Zjn_sc00009.1.g08870.1.sm.mkhc 234 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLQEENERLKR 276 79*************************************9995 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.6E-10 | 230 | 301 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.611 | 232 | 277 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.31E-11 | 234 | 281 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.8E-14 | 234 | 278 | No hit | No description |
CDD | cd14707 | 2.95E-25 | 234 | 279 | No hit | No description |
Pfam | PF00170 | 2.7E-12 | 234 | 276 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 237 | 252 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 309 aa Download sequence Send to blast |
MQRLARQGSL YNLTLDEVQS HLGEPLHSMN LDELLKSVFP DGLDPDGATT SEHEQASGLL 60 RQASISMPPE LSKKTVDEVW KGIQDGPKRN AEEGSRRRRE RQPTLGEMTL EDFLVKAGVV 120 TEGYLKDLND VGNVDQVGMA GAACLTRGAQ WLDQYQQQFT AIDAHQHGQY SIPGAYMLSR 180 LALQPLNVVP SAIVESAYSN GNITSPMMGT LSDSPTPVRK RGATGDVADK LMERRQKRMI 240 KNRESAARSR ARKQAYTNEL ENKVSRLQEE NERLKRQKHS IIRIVINDGP KGLSMREILM 300 ESNALAFAV |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |
Binding Motif ? help Back to Top | |||
---|---|---|---|
Motif ID | Method | Source | Motif file |
MP00409 | DAP | Transfer from AT3G56850 | Download |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_025818579.1 | 1e-171 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X2 | ||||
Swissprot | Q9LES3 | 2e-66 | AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
TrEMBL | A0A3L6SJ47 | 1e-170 | A0A3L6SJ47_PANMI; ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
STRING | Pavir.Eb03523.1.p | 1e-168 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2707 | 38 | 83 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G56850.1 | 1e-68 | ABA-responsive element binding protein 3 |
Publications ? help Back to Top | |||
---|---|---|---|
|