PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zjn_sc00009.1.g03460.1.sm.mkhc | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | G2-like | ||||||||
Protein Properties | Length: 153aa MW: 17255.5 Da PI: 7.5963 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 45.2 | 2.1e-14 | 40 | 68 | 27 | 55 |
G2-like 27 AtPktilelmkvkgLtlehvkSHLQkYRl 55 Pk+il+lm+v+gLt+e+v+SHLQkYRl Zjn_sc00009.1.g03460.1.sm.mkhc 40 VGPKKILDLMNVPGLTRENVASHLQKYRL 68 56**************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF52172 | 4.23E-5 | 9 | 38 | IPR011006 | CheY-like superfamily |
Gene3D | G3DSA:3.40.50.2300 | 2.0E-6 | 12 | 38 | No hit | No description |
SuperFamily | SSF46689 | 6.45E-9 | 29 | 72 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.5E-12 | 37 | 68 | IPR006447 | Myb domain, plants |
Gene3D | G3DSA:1.10.10.60 | 4.5E-15 | 39 | 73 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 153 aa Download sequence Send to blast |
MALADATAFP YGLRVLVVDD DPTWLKILEK MLKKCSYEEV GPKKILDLMN VPGLTRENVA 60 SHLQKYRLYL SRLQKQNEER AMGSTRQDFS YKGPSDNLNL RSSFQEQPGN IASGYQNGSQ 120 KIQNQINMTD SHLEDKKVVV PLHNASESGQ EAV |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025817738.1 | 3e-54 | two-component response regulator ORR26 | ||||
Swissprot | Q5N6V8 | 3e-51 | ORR26_ORYSJ; Two-component response regulator ORR26 | ||||
TrEMBL | A0A1E5VJT1 | 1e-74 | A0A1E5VJT1_9POAL; Two-component response regulator ORR26 | ||||
STRING | Pavir.Ea03527.1.p | 1e-54 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP5900 | 37 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67710.1 | 1e-17 | response regulator 11 |
Publications ? help Back to Top | |||
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