PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zjn_sc00008.1.g09950.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | BES1 | ||||||||
Protein Properties | Length: 744aa MW: 78367.1 Da PI: 8.342 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 205.6 | 1.4e-63 | 359 | 486 | 2 | 129 |
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaa 82 g gr+ptwkErEnnkrRERrRRaiaaki++GLRa Gnyklpk++DnneVlkALcreAGwvvedDGttyr+g+kp+ + a Zjn_sc00008.1.g09950.1.am.mk 359 GVGRTPTWKERENNKRRERRRRAIAAKIFTGLRALGNYKLPKHCDNNEVLKALCREAGWVVEDDGTTYRRGCKPP-PGAGA 438 789************************************************************************.88888 PP DUF822 83 gssasaspesslq.sslkssalaspvesysaspksssfpspssldsis 129 sp+ss+q +s+ ss++aspv+sy+as +sssfpsps+l+++ Zjn_sc00008.1.g09950.1.am.mk 439 ALAGMLSPCSSSQlLSAPSSSFASPVPSYHASAASSSFPSPSRLENNA 486 88999********9*****************************99875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00685 | 1.13E-65 | 1 | 244 | No hit | No description |
SuperFamily | SSF48576 | 8.0E-73 | 1 | 238 | IPR008949 | Isoprenoid synthase domain |
Gene3D | G3DSA:1.10.600.10 | 3.1E-85 | 1 | 246 | IPR008949 | Isoprenoid synthase domain |
Pfam | PF00348 | 2.6E-46 | 14 | 223 | IPR000092 | Polyprenyl synthetase |
PROSITE pattern | PS00723 | 0 | 31 | 47 | IPR000092 | Polyprenyl synthetase |
PROSITE pattern | PS00444 | 0 | 172 | 184 | IPR000092 | Polyprenyl synthetase |
Pfam | PF05687 | 9.6E-61 | 360 | 505 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0043693 | Biological Process | monoterpene biosynthetic process | ||||
GO:0009507 | Cellular Component | chloroplast | ||||
GO:0009513 | Cellular Component | etioplast | ||||
GO:0004161 | Molecular Function | dimethylallyltranstransferase activity | ||||
GO:0004311 | Molecular Function | farnesyltranstransferase activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 744 aa Download sequence Send to blast |
LCLAACGVAG GREAWAMPPA AALEMVHTMS LVHDDLPCMD DDDLRRGKPT CHVVYGEPIA 60 VLAGDALLSL AFRHMASVDS YPADVDPEKH PARVVRAIGE LARCIGSEGL VAGQVVDLEM 120 TGSTGIVPLE KLEYIHLHKT AALLEASVVI GAIIGGGSDE QIERLRKYAR SIGLLFQVVD 180 DILDVTKSSE ELGKTAGKDL ASDKTTYPKL LGLEKSREFA EKLLCDAREQ LADFDKEKAA 240 PLRDKVTVLP SPPRDRASSP VLYPGQGTPR SVPGPREGKL KAAAARHDTS APLCYSAAGA 300 NKTPPSPPRL LSVASVPLPS KQGSIRTKWG RGGEHSARSR GAAEGGEEGS MSSGAAAGGV 360 GRTPTWKERE NNKRRERRRR AIAAKIFTGL RALGNYKLPK HCDNNEVLKA LCREAGWVVE 420 DDGTTYRRGC KPPPGAGAAL AGMLSPCSSS QLLSAPSSSF ASPVPSYHAS AASSSFPSPS 480 RLENNAPVTP VLPAAACLQM LPFLRGLPNL PPLRVSNSAP VTPPLSSPTA APVPSYHASA 540 ASSSFPSPSR LENNAPVTPV LPAAACLQML PFLRGLPNLP PLRVSNSAPV TPPLSSPTAA 600 SRPPPAKVRR PDWDAAVVGD PFCHPFFAVS APASPTRARR RAHPDTIPEC DESDVSTVHS 660 GRWISFQMAP TTAPASPTYN LVNRCGASSS NSMEMDGSAP AADRGRGGAE FAFDKGRVVT 720 PWEGERIHEV AAEELELTLG VGAK |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5xn5_A | 1e-134 | 1 | 242 | 52 | 293 | Os07g0580900 protein |
5xn5_B | 1e-134 | 1 | 242 | 52 | 293 | Os07g0580900 protein |
5xn6_A | 1e-134 | 1 | 242 | 52 | 293 | Os07g0580900 protein |
5xn6_B | 1e-134 | 1 | 242 | 52 | 293 | Os07g0580900 protein |
5xn6_E | 1e-134 | 1 | 242 | 52 | 293 | Os07g0580900 protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1943 | 2 | 3 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75080.2 | 1e-24 | BES1 family protein |