PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zjn_sc00008.1.g04120.1.sm.mkhc | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | bZIP | ||||||||
Protein Properties | Length: 257aa MW: 27225.8 Da PI: 10.818 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 23.7 | 1.1e-07 | 169 | 211 | 21 | 63 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 21 RqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 R RKk+++ e ++ + +L+ eN+aL++e++ l+k + +l +e+ Zjn_sc00008.1.g04120.1.sm.mkhc 169 RPRKKMRLPEIQQMMRSLSVENDALRQEMKALQKACTALSKEN 211 89*************************************9987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 4.7E-5 | 169 | 207 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence Send to blast |
MTAAVDVEPC ALVATAADII CSFRAADLAG WTPPWRKRPD PPARDDDAAD AREQLVAWPG 60 VARGKRSRSR SRRGSSPSAS AGSGSAGARK TKKKEARRAR GSPPSPLDYS AGSGASTSGG 120 EDGAFCSPPP PVLSSMGGVL QVDPVNSKVG LAGRRSIPPV PPPRPTGQRP RKKMRLPEIQ 180 QMMRSLSVEN DALRQEMKAL QKACTALSKE NGKLETRLHQ LNKREEKKGK LQAGQGATEE 240 AQNGFALPDL NLPAHDG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 64 | 69 | KRSRSR |
2 | 168 | 174 | RPRKKMR |
3 | 222 | 229 | KREEKKGK |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT054292 | 7e-56 | BT054292.1 Zea mays full-length cDNA clone ZM_BFb0217J09 mRNA, complete cds. | |||
GenBank | KJ728326 | 7e-56 | KJ728326.1 Zea mays clone pUT6607 bZIP transcription factor (bZIP93) mRNA, partial cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025811831.1 | 5e-78 | collagen alpha-1(I) chain-like | ||||
TrEMBL | A0A3L6PC00 | 3e-78 | A0A3L6PC00_PANMI; Uncharacterized protein | ||||
STRING | GRMZM2G050912_P01 | 3e-61 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3790 | 29 | 51 |