PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00007.1.g08050.1.sm.mkhc
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 478aa    MW: 50449.4 Da    PI: 6.1131
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00007.1.g08050.1.sm.mkhcgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.44.5e-31221279259
                                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                     +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers++dp++++itY++eHnh+
  Zjn_sc00007.1.g08050.1.sm.mkhc 221 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRTDPSMLVITYNSEHNHP 279
                                     699************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081132.902215281IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.2E-31217281IPR003657WRKY domain
SuperFamilySSF1182902.35E-26218281IPR003657WRKY domain
SMARTSM007742.9E-38220280IPR003657WRKY domain
PfamPF031062.6E-26222279IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 478 aa     Download sequence    Send to blast
MCDYFSQRME GDHNHQHHQA GDLADIVRAG GVGLADLPST PTEWHLPAEP GTTSFFPLPQ  60
QQSSSDDDGF VVADALAVGL PDPFGTRDYR AASAAGAAGF FDFEAPVGGG GGGGALLDCG  120
GGGVVVPRAT PVLSPPEIRP YPGMMAGDAV KLLGMPTVMP GGLTVGPPCA FDGVGGLHQM  180
PSPCGGGGRI KRRKNQARKV ICIPAPAALA GGRTTGEVVP SDLWAWRKYG QKPIKGSPYP  240
RGYYRCSSSK GCPARKQVER SRTDPSMLVI TYNSEHNHPW PTQRNALAGS TRSHHAKNNG  300
NNSSSKKNSS LQRPMVKAEW DQTAAAEATT TTTTSTSNST PPATSVKEEE MMASEMEKAG  360
VQQHAGHHDT SAVTLDPGDL MQQMFNQSYR PMIPEGGHHV DDFFADLAEL ESDPMSLIFS  420
KEYMETKPGG EPAAKEMAGP TKSLVDPLFN MLDWGATTAA VATFAGSSSL EQQGESGL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B1e-23194282280Disease resistance protein RRS1
5w3x_D1e-23194282280Disease resistance protein RRS1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1187195GRIKRRKNQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004953547.10.0probable WRKY transcription factor 14
TrEMBLA0A2T7FAW80.0A0A2T7FAW8_9POAL; Uncharacterized protein
STRINGSi017095m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP25923888
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.14e-58WRKY DNA-binding protein 35