PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00007.1.g03740.1.sm.mkhc

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 343aa MW: 37020.4 Da PI: 8.8393

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00007.1.g03740.1.sm.mkhc	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	47.2	4.8e-15	262	315	5	57
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk.keleelkkeva 57 +r+rr++kNRe+A rsRq+K+a++ eLe +v++L++ N++L+ k++e+l+k+ Zjn_sc00007.1.g03740.1.sm.mkhc 262 RRQRRMIKNRESAARSRQKKQAYVMELEAEVAKLKELNEELQkKQVEMLEKQQN 315 79***************************************6156788888765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.5E-13	258	323	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.806	260	305	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.61E-10	262	309	No hit	No description
CDD	cd14707	1.58E-23	262	313	No hit	No description
Pfam	PF00170	3.4E-13	262	315	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.2E-14	262	316	No hit	No description
PROSITE pattern	PS00036	0	265	280	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence Send to blast
MELPGGNGKR RQQRQMEEHL PPMTPLPLAR QGSVYSLTFD EFQSALGGPN NDFGSMNMDE 60 LLRSIWTAEE SQAVGAANAS AAADQAAAIQ RQGSLTLPRT LSQKTVDEVW RNIMCVGGPS 120 DAPTAAAPIP PTQRQQTLGE ITLEEFLVRA GVVREDMTAG PPALPVQAPP PPPPPTSQPQ 180 MLFPQGNVFA PLVPPLPLGN GLVAGGGGTA PAVPPVQLVT SNGFGKMEGD DLSSLSPSPV 240 PYVFNGGLRG RKPSAIEKVV ERRQRRMIKN RESAARSRQK KQAYVMELEA EVAKLKELNE 300 ELQKKQVEML EKQQNEVLES MTQRVGPTAK RICLRRTLTG PCA

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence Send to blast

MELPGGNGKR RQQRQMEEHL PPMTPLPLAR QGSVYSLTFD EFQSALGGPN NDFGSMNMDE  60
LLRSIWTAEE SQAVGAANAS AAADQAAAIQ RQGSLTLPRT LSQKTVDEVW RNIMCVGGPS  120
DAPTAAAPIP PTQRQQTLGE ITLEEFLVRA GVVREDMTAG PPALPVQAPP PPPPPTSQPQ  180
MLFPQGNVFA PLVPPLPLGN GLVAGGGGTA PAVPPVQLVT SNGFGKMEGD DLSSLSPSPV  240
PYVFNGGLRG RKPSAIEKVV ERRQRRMIKN RESAARSRQK KQAYVMELEA EVAKLKELNE  300
ELQKKQVEML EKQQNEVLES MTQRVGPTAK RICLRRTLTG PCA

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator that mediates abscisic acid (ABA) signaling (PubMed:18931143, PubMed:19947981, PubMed:27424498, PubMed:27325665). Can regulate the expression of a wide spectrum of stress-related genes in response to abiotic stresses through an ABA-dependent regulation pathway. Confers ABA-dependent drought and salinity tolerance (PubMed:18931143, PubMed:27325665). Binds specifically to the ABA-responsive elements (ABRE) in the promoter of target genes to mediate stress-responsive ABA signaling (PubMed:27325665, PubMed:27424498). {ECO:0000269\|PubMed:18931143, ECO:0000269\|PubMed:19947981, ECO:0000269\|PubMed:27325665, ECO:0000269\|PubMed:27424498}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by abscisic acid (ABA) (PubMed:18315698, PubMed:18931143). Induced by drought, salt and osmotic stresses (PubMed:18931143). {ECO:0000269\|PubMed:18315698, ECO:0000269\|PubMed:18931143}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004954029.1	1e-162	bZIP transcription factor 23
Swissprot	Q6Z312	1e-148	BZP23_ORYSJ; bZIP transcription factor 23
TrEMBL	K3YTP4	1e-160	K3YTP4_SETIT; Uncharacterized protein
STRING	Pavir.J00256.1.p	1e-153	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP706	38	147

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19290.3	3e-35	ABRE binding factor 4

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Xiang Y,Tang N,Du H,Ye H,Xiong L Characterization of OsbZIP23 as a key player of the basic leucine zipper transcription factor family for conferring abscisic acid sensitivity and salinity and drought tolerance in rice. Plant Physiol., 2008. 148(4): p. 1938-52 [PMID:18931143] Shen J,Xie K,Xiong L Global expression profiling of rice microRNAs by one-tube stem-loop reverse transcription quantitative PCR revealed important roles of microRNAs in abiotic stress responses. Mol. Genet. Genomics, 2010. 284(6): p. 477-88 [PMID:20941508] Luo C,Guo C,Wang W,Wang L,Chen L Overexpression of a new stress-repressive gene OsDSR2 encoding a protein with a DUF966 domain increases salt and simulated drought stress sensitivities and reduces ABA sensitivity in rice. Plant Cell Rep., 2014. 33(2): p. 323-36 [PMID:24247850] Sakuraba Y, et al. Rice ONAC106 Inhibits Leaf Senescence and Increases Salt Tolerance and Tiller Angle. Plant Cell Physiol., 2015. 56(12): p. 2325-39 [PMID:26443376] Hong Y,Zhang H,Huang L,Li D,Song F Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice. Front Plant Sci, 2016. 7: p. 4 [PMID:26834774] Dey A,Samanta MK,Gayen S,Sen SK,Maiti MK Enhanced Gene Expression Rather than Natural Polymorphism in Coding Sequence of the OsbZIP23 Determines Drought Tolerance and Yield Improvement in Rice Genotypes. PLoS ONE, 2016. 11(3): p. e0150763 [PMID:26959651] Zong W, et al. Feedback Regulation of ABA Signaling and Biosynthesis by a bZIP Transcription Factor Targets Drought-Resistance-Related Genes. Plant Physiol., 2016. 171(4): p. 2810-25 [PMID:27325665] Dey A,Samanta MK,Gayen S,Maiti MK The sucrose non-fermenting 1-related kinase 2 gene SAPK9 improves drought tolerance and grain yield in rice by modulating cellular osmotic potential, stomatal closure and stress-responsive gene expression. BMC Plant Biol., 2016. 16(1): p. 158 [PMID:27411911] Gui J, et al. OsREM4.1 Interacts with OsSERK1 to Coordinate the Interlinking between Abscisic Acid and Brassinosteroid Signaling in Rice. Dev. Cell, 2016. 38(2): p. 201-13 [PMID:27424498]