PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00004.1.g03270.1.sm.mkhc
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 375aa    MW: 40730.1 Da    PI: 5.6204
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00004.1.g03270.1.sm.mkhcgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.52.2e-11177235563
                                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                                     kr++r   NR +A rs +RK  +i+eLe+kv++L++e ++L  ++++l+   + l+se+
  Zjn_sc00004.1.g03270.1.sm.mkhc 177 KRAKRILANRQSAARSKERKMRYIAELERKVQTLQTEATTLSAQMSMLQRDTSGLTSEK 235
                                     9***********************************************99998888875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.6E-15173237IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.99175238IPR004827Basic-leucine zipper domain
PfamPF001702.5E-9177234IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.4E-11177232No hitNo description
SuperFamilySSF579594.15E-11177228No hitNo description
CDDcd147032.48E-23178227No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    Send to blast
MDQAPIVDPA AAASASTSSA AEAAASRDVA AMLPNSPLRR GAGHRRAQSE ILLGGALPDD  60
LTFDADLGVV GEAGRDEYEE DDDDDDEECA GGSSRMFEMF LENNGGLTEP TEPSPHPHQQ  120
APPAAPTARP RHQYSMSMDG STSLGYSSAG MAGRSGADAK KAISDAKLAE LALVDPKRAK  180
RILANRQSAA RSKERKMRYI AELERKVQTL QTEATTLSAQ MSMLQRDTSG LTSEKSDLKM  240
RVQTMEQQVR LQDALNDRLR DEIQQLKIAT GQVNANITKM ENFDPSLYGG NPQSYQRTQI  300
QSLLAAQQLQ QLQIHSQHQR QQTHLQQQPL STAQQHQLRQ EAILFSGDHK MKGLATTSFS  360
QNAGASDGHA VNSEP
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor with an activatory role.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001353704.11e-155uncharacterized protein LOC100382174
SwissprotQ040883e-82POF21_ARATH; Probable transcription factor PosF21
TrEMBLC0PDU91e-154C0PDU9_MAIZE; BZIP transcription factor
STRINGGRMZM2G112483_P011e-154(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP123022937
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06070.11e-72bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Xu C, et al.
    Control of auxin-induced callus formation by bZIP59-LBD complex in Arabidopsis regeneration.
    Nat Plants, 2018. 4(2): p. 108-115
    [PMID:29358751]