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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Zjn_sc00003.1.g08170.1.am.mk |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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| Family |
YABBY |
| Protein Properties |
Length: 330aa MW: 36370.8 Da PI: 10.9817 |
| Description |
YABBY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zjn_sc00003.1.g08170.1.am.mk | genome | ZGD | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | YABBY | 110.9 | 2.3e-34 | 134 | 283 | 24 | 162 |
YABBY 24 vsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkee....lleelkveeenlksnv......ekeesast 94
v vP + l+ +vtv+CGhC +l ++l+ + + ++ + + l + + + ++ + v ++ + +
Zjn_sc00003.1.g08170.1.am.mk 134 VGVPCKRLMDTVTVKCGHCNNLSYLSLRPPMVQPPSPTD--HPLGPFqverSTLNSTTHPYLFVAVVpsaapsWEKGHCND 212
88********************98889888777666553..3443331112333333333333322200000022333333 PP
YABBY 95 svssekl...senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWah 162
++++ l s + e r p v++PPek+ r Psaynrf++eeiqrika+ Pdi hreafs+aaknWa
Zjn_sc00003.1.g08170.1.am.mk 213 CRRNQPLplpSPTSAEVGRRLPFVVKPPEKKHRLPSAYNRFMREEIQRIKAAKPDIPHREAFSMAAKNWAK 283
33333436644444555555666**********************************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 330 aa
Download sequence Send
to blast |
MQHRRSSLAR PTDRCGWSRA YGAMCAGPGH YCRNRNPTPS SLGTRPATFP LLLPPPSPSS 60
SPDSVRHPAK EACTPEGLTH RSAAVASAAK HQAPSKHGFG GAVRAPVLRA LHLLQHSARG 120
KLLERNRIRS GSRVGVPCKR LMDTVTVKCG HCNNLSYLSL RPPMVQPPSP TDHPLGPFQV 180
ERSTLNSTTH PYLFVAVVPS AAPSWEKGHC NDCRRNQPLP LPSPTSAEVG RRLPFVVKPP 240
EKKHRLPSAY NRFMREEIQR IKAAKPDIPH REAFSMAAKN WAKCDPRCST AVSTASSNNA 300
PQPRVMLLQE RAKEQVVESF DIFKQIERSI
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| Functional Description ? help
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| Source |
Description |
| UniProt | Regulates carpel specification in flower development. Severe or intermediate mutation in DL causes complete or partial homeotic conversion of carpels into stamens without affecting the identities of other floral organs. Interacts antagonistically with class B genes and controls floral meristem determinacy. Regulates midrib formation in leaves probably by inducing cell proliferation in the central region of the leaf. {ECO:0000269|PubMed:14729915}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AB470268 | 2e-81 | AB470268.1 Sorghum bicolor SbDL mRNA for DL related protein, complete cds. |
