PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00001.1.g08980.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family Dof
Protein Properties Length: 773aa    MW: 80943.3 Da    PI: 11.3223
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00001.1.g08980.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof121.92.3e-38474532361
                        zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 
                                    +al+cprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+s
  Zjn_sc00001.1.g08980.1.am.mk 474 AEALRCPRCDSANTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRS 532
                                   57899****************************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074786.0E-30471530IPR003851Zinc finger, Dof-type
PfamPF027014.9E-33476531IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.385477531IPR003851Zinc finger, Dof-type
PROSITE patternPS013610479515IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0048364Biological Processroot development
GO:0005634Cellular Componentnucleus
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 773 aa     Download sequence    Send to blast
MQSRAEAALQ QGRTTRAGER RQLHGRYTYR QPQPTAGWSG SIDRLARPAG VPSLASRARS  60
IAPRLMRRIL LFRQRRNPDR VSTLTARAST TYRGTVHGTR CSCTVPRQVR RASGVAVDDT  120
AGPRLEHDFH APLLQVRPGR MMSVSDTAVV VVASEVVAVR ARPHALSCAR APVDPHRAHA  180
RGVHRRPPPS GARSRPAIDL RFLCWNPRGH EDPFLPSRTR LEYGLGHCVY PLSLSPYDDR  240
SGGDAARLVS RGSARLGSPG PADTRAPRAR QSAADVVFPF SLSLSLSLSL SGGRSARERT  300
PFPRRARGTP GASSESSGPS QGVKNRGRTP CTGEKREPTR VGELFFSGAA KKLRPEPRDS  360
QRRGAPLTGL LLSSPGLLPR DDVIVGYKTR LSGVQPLLSL FIQLGSRRSD RLAPSSTDLC  420
PGRFVSQAAS ICALRRRARE MAGAGGATAV QQPSAGAGKS GTGAAGAPVV DPRAEALRCP  480
RCDSANTKFC YYNNYSLSQP RHFCKACKRY WTRGGTLRNV PVGGGCRKNK RSRTSAASAA  540
GRTVSSAAAA GATSSSAASA LSLPPPAGVS SSMQSLTSAL GLSGGTSLAS LLLGGGSGAD  600
HLGLFQAAMQ SVVSDTTAYE MQQQTQTQVD HLLGLGGYGS GAAGAQIQLK PWIQDSGAGA  660
GGIMDTFYAP LLSGSVVPGL EELHVKAEAA GAGEHQQAKV DAGAGDQNSW ELPTPSSTSN  720
IIASDALMAA AAASMTNNPA PSSFMYWGNG GIGGAAASWP DLANCGSSIA TLF
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP88953041
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.12e-31TARGET OF MONOPTEROS 6